Detailed information NTG0059308

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K6J55_RS05635
• Genome accession: NZ_AP018767
• Coordinates: 1153573..1154913 (+)
• Length: 446 a.a.
• NCBI ID: WP_105897609.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-4 isolate 13H33
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1148573..1159913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J55_RS05620 (CHBNII4_10540)	lrp	1149628..1150107 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
K6J55_RS05625 (CHBNII4_10550)	-	1150109..1152877 (+)	2769	WP_048942775.1	DNA translocase FtsK	-
K6J55_RS05630 (CHBNII4_10560)	lolA	1152895..1153512 (+)	618	WP_005690067.1	outer membrane lipoprotein chaperone LolA	-
K6J55_RS05635 (CHBNII4_10570)	rarA	1153573..1154913 (+)	1341	WP_105897609.1	replication-associated recombination protein A	Machinery gene
K6J55_RS05640 (CHBNII4_10580)	-	1155001..1156143 (-)	1143	WP_011272476.1	hypothetical protein	-
K6J55_RS05645 (CHBNII4_10590)	dcm	1156153..1157376 (-)	1224	WP_221257391.1	DNA (cytosine-5-)-methyltransferase	-
K6J55_RS05650 (CHBNII4_10600)	aroA	1157631..1158929 (-)	1299	WP_011272478.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
K6J55_RS05655 (CHBNII4_10610)	purU	1158929..1159765 (-)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50249.10 Da
• Isoelectric Point: 6.3320

>NTDB_id=59308 K6J55_RS05635 WP_105897609.1 1153573..1154913(+) (rarA) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIERAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAIEDPERGLGKERLILEENLLQVLGEYVNGDARLALNCLELMVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSTVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=59308 K6J55_RS05635 WP_105897609.1 1153573..1154913(+) (rarA) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGTCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACAGGAAAAACAACGCTCGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCCATTGAGCGAGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTATAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGGCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGCGG
TTCTGCTCCAGACGCAGCACTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCAGTAGCCCCAAAAAGTAATGC
GGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTGCCAGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAACTTGGCTATGGGGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGATACTCAATATTATTTTCCAACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTACGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	94.843	0.37