Detailed information NTG0592163

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: KZO26_RS10405
• Genome accession: NZ_CP080329
• Coordinates: 2170026..2172389 (-)
• Length: 787 a.a.
• NCBI ID: WP_035184524.1
• Uniprot ID: -
• Organism: Heyndrickxia coagulans strain VHProbi C08
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2172757..2174172	2170026..2172389	flank	368

Gene organization within MGE regions

Location: 2170026..2174172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO26_RS10405 (KZO26_10405)	recJ	2170026..2172389 (-)	2364	WP_035184524.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
KZO26_RS10410 (KZO26_10410)	-	2172757..2174172 (-)	1416	WP_014095994.1	ISLre2-like element ISBco6 family transposase	-

Sequence

Protein

• Length: 787 a.a.
• Molecular weight: 87964.94 Da
• Isoelectric Point: 5.5794

>NTDB_id=592163 KZO26_RS10405 WP_035184524.1 2170026..2172389(-) (recJ) [Heyndrickxia coagulans strain VHProbi C08]
MLQSRTRWRVPEMDPKAAATISQQLNVSPLVSKLLVNRGITDVEEARSFLFHEGLAYYDPFLLHDMEKAAARIREAIKKE
EPVLVFGDYDADGVTSTAIMMAALNDLGAHAEFYIPDRFKEGYGPNEAAFRRAAEEGFQLIITVDTGIAAVHEAEVAREL
GITLIITDHHEPGPVLPEAFAIVHPKHPESTYPFRELSGAGVAFKVAHALYGKVPEQLEDLAAIGTVADLVPLLDENRLI
AINGIKRLRTTKRAGLVALCRCADIRQEEINEETIGFVLAPRLNAAGRLQHAAPAAELLMTEDTEEAGMLAETIDGLNKE
RQKIVNDMTNEAIELVEEEVEKGARVLVVGKEGWNAGVIGIAASRLTERFYRPAIVLSFDPETGLAKGSARSIDGFHMFN
ELSKCRDILPHFGGHPMAAGMTLSLSDVEELRRRLNEQAAALPDEMFVPVTNISAEISIEEAGMEAIREMALLSPFGTAN
PKPLLLLDGAECPQIRAIGADGKHLKLTLSKNGTTLDGIGFGLGNLAPHISPSACISVVGELSINEWNNIRKPQMMVKDI
KITNWQLFDFRGNRPLKQWARYVPEEDQAFVVFQKETLRNLPLPDFSVRLVSVATMEEARAFDPSNKNIVFLDLPKGPRM
MAALLEGGSPARIYAYFYHAGNHFFSTFPTREHFKWFYAFLAKRKTFNLKQHGDELAAYRGWSRNTIDFISQVFFELDFV
TIKDGFISLKAAKQKRDLKESLTYQKKLAQYQMEKDLLYSSFQELKMWFDQMIKPAVQYEEETAKWI

Nucleotide

• Length: 2364 bp

>NTDB_id=592163 KZO26_RS10405 WP_035184524.1 2170026..2172389(-) (recJ) [Heyndrickxia coagulans strain VHProbi C08]
ATGCTGCAGTCAAGAACAAGATGGCGGGTGCCGGAAATGGATCCAAAAGCAGCCGCAACGATCTCGCAACAATTGAACGT
TTCGCCACTTGTTTCAAAATTGCTTGTAAACCGCGGCATAACGGATGTTGAAGAAGCGCGGTCTTTTTTATTCCATGAAG
GGCTAGCGTATTATGATCCGTTTTTGCTGCATGATATGGAAAAAGCAGCGGCCCGCATCCGCGAAGCGATTAAAAAAGAA
GAACCGGTTCTCGTCTTCGGCGATTACGATGCGGACGGCGTAACGAGTACTGCCATCATGATGGCCGCTTTAAACGATCT
TGGCGCCCATGCTGAATTTTATATCCCGGACCGGTTTAAAGAAGGGTATGGGCCAAATGAAGCGGCTTTCCGCCGGGCGG
CTGAAGAGGGTTTTCAGCTAATCATTACCGTTGATACCGGTATTGCCGCTGTCCACGAAGCGGAAGTGGCCCGCGAACTC
GGGATCACGCTCATTATTACGGACCATCACGAACCTGGGCCGGTATTGCCGGAAGCCTTTGCCATCGTCCATCCGAAGCA
TCCGGAAAGTACATACCCGTTCCGGGAACTGTCGGGCGCAGGCGTCGCTTTTAAAGTCGCCCATGCGCTGTACGGCAAAG
TGCCGGAACAGCTTGAAGATTTGGCCGCTATCGGGACGGTCGCGGATCTTGTGCCGCTTCTGGACGAAAACCGGCTGATT
GCCATAAACGGCATCAAACGGTTGAGAACGACAAAGCGGGCGGGGCTTGTGGCGCTGTGCCGGTGTGCGGATATCCGCCA
GGAAGAGATCAATGAAGAAACCATCGGCTTTGTGCTCGCCCCCCGCTTAAATGCAGCCGGGCGCCTGCAGCATGCGGCAC
CGGCAGCGGAACTGCTAATGACCGAAGACACAGAAGAAGCCGGGATGCTCGCTGAAACGATTGACGGGCTCAATAAAGAA
CGGCAAAAAATCGTAAACGACATGACAAATGAAGCAATCGAACTGGTGGAAGAAGAAGTGGAAAAGGGGGCGCGTGTCCT
TGTTGTCGGGAAAGAAGGCTGGAATGCCGGCGTAATCGGCATTGCCGCCTCGCGCCTTACAGAACGCTTTTACCGGCCTG
CGATTGTGCTCAGCTTTGACCCGGAAACAGGGCTGGCAAAAGGATCGGCGCGCAGCATTGACGGCTTCCATATGTTTAAC
GAATTATCGAAATGCAGGGATATTTTGCCGCATTTTGGCGGGCATCCGATGGCGGCGGGGATGACGCTTTCTTTATCCGA
TGTGGAGGAACTGCGGCGCCGGCTGAACGAACAGGCCGCGGCATTGCCGGACGAGATGTTTGTGCCGGTTACGAACATCA
GCGCTGAAATTTCCATAGAAGAAGCGGGGATGGAAGCGATCCGCGAAATGGCATTGCTCTCGCCGTTTGGCACGGCGAAT
CCGAAGCCGCTTCTGTTGCTGGACGGGGCCGAATGCCCGCAAATCCGGGCGATCGGCGCAGACGGGAAACATTTGAAATT
GACGCTTTCTAAAAACGGCACAACGCTCGATGGGATCGGCTTCGGGCTCGGGAATCTTGCCCCGCATATTTCCCCTTCTG
CCTGCATATCGGTTGTCGGGGAGCTGTCCATCAACGAATGGAACAATATCCGTAAGCCGCAAATGATGGTGAAGGATATC
AAAATCACAAACTGGCAATTGTTTGATTTCAGGGGCAACAGGCCTTTAAAGCAATGGGCACGGTACGTCCCGGAAGAAGA
CCAGGCTTTTGTTGTCTTCCAAAAAGAAACATTGCGGAACCTGCCGCTGCCGGATTTTTCCGTCCGCCTTGTGTCGGTTG
CGACAATGGAAGAGGCAAGGGCATTTGATCCTTCAAATAAAAACATTGTGTTTCTGGATCTTCCGAAAGGCCCGCGGATG
ATGGCGGCACTGCTTGAGGGCGGTTCGCCGGCCAGGATTTATGCGTATTTTTACCATGCCGGGAACCACTTTTTCAGCAC
GTTCCCGACACGCGAACATTTTAAATGGTTTTACGCTTTTCTTGCAAAAAGGAAAACGTTCAACCTAAAGCAGCACGGGG
ATGAGCTGGCGGCTTATCGCGGCTGGTCGAGAAATACCATCGATTTTATTTCGCAGGTGTTTTTTGAACTTGATTTTGTT
ACAATAAAGGATGGATTTATTTCCCTGAAAGCAGCCAAACAAAAACGCGATTTAAAGGAATCTCTTACGTATCAAAAAAA
ACTAGCACAATATCAAATGGAAAAGGACCTGCTGTACTCATCTTTCCAGGAGCTGAAGATGTGGTTTGACCAAATGATCA
AGCCTGCTGTACAGTATGAGGAGGAAACAGCAAAATGGATTTAA

Domains

Predicted by InterproScan.

• DHH family (DHH) (83-226)

• DHHA1 domain (DHHA1) (315-438)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (566-769)

• RecJ OB domain (RecJ_OB) (454-559)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	52.859	100	0.529