Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KX728_RS08040 Genome accession   NZ_CP079724
Coordinates   1667595..1669355 (-) Length   586 a.a.
NCBI ID   WP_000428384.1    Uniprot ID   A0A139PVN9
Organism   Streptococcus oralis strain 34     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1662595..1674355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS08010 (KX728_08005) - 1663273..1664940 (-) 1668 WP_139658960.1 DAK2 domain-containing protein -
  KX728_RS08015 (KX728_08010) - 1664943..1665308 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  KX728_RS08020 (KX728_08015) rpmB 1665461..1665649 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  KX728_RS08025 (KX728_08020) - 1665754..1666428 (-) 675 WP_000725755.1 hypothetical protein -
  KX728_RS08030 (KX728_08025) - 1666434..1666880 (-) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  KX728_RS08035 (KX728_08030) - 1666994..1667497 (-) 504 WP_000800936.1 phosphatase PAP2 family protein -
  KX728_RS08040 (KX728_08035) rcrQ 1667595..1669355 (-) 1761 WP_000428384.1 ABC transporter ATP-binding protein Regulator
  KX728_RS08045 (KX728_08040) rcrP 1669345..1671114 (-) 1770 WP_000731807.1 ABC transporter ATP-binding protein Regulator
  KX728_RS08050 (KX728_08045) - 1671098..1671559 (-) 462 WP_215804321.1 MarR family winged helix-turn-helix transcriptional regulator -
  KX728_RS08055 (KX728_08050) - 1671753..1672457 (+) 705 WP_215804320.1 CD20-like domain-containing protein -
  KX728_RS08060 (KX728_08055) - 1672508..1673224 (-) 717 WP_000532891.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64511.20 Da        Isoelectric Point: 5.1159

>NTDB_id=588996 KX728_RS08040 WP_000428384.1 1667595..1669355(-) (rcrQ) [Streptococcus oralis strain 34]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIAGFLVVLYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLSDMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYELDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISDERMIEAAKAVGIHHFIMTLPDGYDTILDDTVTL
SVGQRQLLTIARALIKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=588996 KX728_RS08040 WP_000428384.1 1667595..1669355(-) (rcrQ) [Streptococcus oralis strain 34]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTTCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGCATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GCTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTGGATTTTTGGTTGTCCTATATGTGTTTGGAGCTATC
CTTAATTATACACAGGCCTATATATTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGACACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTAGCTCTCGTAACAGTGGTCTCTACGCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTAGACACCTCCAAAGCGAGATTTGCAGGGTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAATTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGGGCCGCGCTGGCGTTAGAAGGGCATATCACTATAGGGATTATCGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCCTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCTGAGATGCAGGATGAATCTCATAAGGAGAGACAATTGAGCGACATGAAAGGGGAAGTAGTCTTTGA
TCACGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGATTTTTCTGCGACAGCTCATGCAGGTCAAAAGGTCG
CAATCGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGCTAGATAAGGGAAGT
ATCCGCATTGATGGTGTGGATACCAAGGACATGAAGCGCTCTGAAGTGCACGATGCCTTTTCAATGGTCTTGCAGGATAC
TTGGCTCTTTGAAGGAACCATTCGTGATAATCTCATCTACAACCAAACAGGGATTAGTGATGAACGAATGATTGAAGCAG
CAAAAGCAGTAGGAATCCACCACTTTATCATGACCCTACCAGATGGATACGATACTATTTTAGATGATACAGTGACCTTG
TCAGTCGGACAGAGACAGCTCTTAACCATTGCTCGTGCCCTTATCAAAGATGCACCACTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAAGGTCGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAACAAGGCAAT
CATGAAGAACTCATGGCTCAAGGTGGTTTCTATGCGGATCTCTATAATAGTCAGTTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139PVN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.61

99.659

0.664