Detailed information NTG0585649

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: KVP03_RS03325
• Genome accession: NZ_CP077959
• Coordinates: 649242..650177 (+)
• Length: 311 a.a.
• NCBI ID: WP_111677723.1
• Uniprot ID: A0AAX2LIV6
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ_14-145
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 644242..655177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KVP03_RS03305 (KVP03_03285)	-	644404..646062 (+)	1659	WP_165623316.1	peptide ABC transporter substrate-binding protein	-
KVP03_RS03310 (KVP03_03290)	-	646229..647143 (+)	915	WP_012514937.1	ABC transporter permease	-
KVP03_RS03315 (KVP03_03295)	-	647153..648184 (+)	1032	WP_021320347.1	ABC transporter permease	-
KVP03_RS03320 (KVP03_03300)	oppD	648196..649242 (+)	1047	WP_021320348.1	ABC transporter ATP-binding protein	Regulator
KVP03_RS03325 (KVP03_03305)	amiF	649242..650177 (+)	936	WP_111677723.1	ABC transporter ATP-binding protein	Regulator
KVP03_RS03330 (KVP03_03310)	rnjA	650768..652450 (-)	1683	WP_012514941.1	ribonuclease J1	-
KVP03_RS03335 (KVP03_03315)	-	652452..652682 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
KVP03_RS03340 (KVP03_03320)	tsaB	652968..653666 (+)	699	WP_165622647.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
KVP03_RS03345 (KVP03_03325)	rimI	653669..654094 (+)	426	WP_230923210.1	ribosomal protein S18-alanine N-acetyltransferase	-
KVP03_RS03350 (KVP03_03330)	tsaD	654084..655100 (+)	1017	WP_126436307.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35071.16 Da
• Isoelectric Point: 7.6971

>NTDB_id=585649 KVP03_RS03325 WP_111677723.1 649242..650177(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERKRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEADQYRAERDL

Nucleotide

• Length: 936 bp

>NTDB_id=585649 KVP03_RS03325 WP_111677723.1 649242..650177(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAAGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAACTGTATGACATTAGTGATGGTGAGATTATCTTTAACGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCACAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGCCGTAT
GAAAATTAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AGGAGCTGTTAAAGCTTGTTGGGCTCAATCAGGACCATTTGACGCGCTACCCACATGAATTTTCCGGTGGTCAACGCCAG
CGCATTGGCATTGCGCGTGCCTTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCTCACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCTGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAA
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTACCGAGCAGAGCGTGACCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.248	98.392	0.534
amiF	Streptococcus thermophilus LMG 18311	53.922	98.392	0.531
amiF	Streptococcus salivarius strain HSISS4	53.595	98.392	0.527