Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   MW889_RS14545 Genome accession   NZ_CP095867
Coordinates   3065070..3065567 (-) Length   165 a.a.
NCBI ID   WP_033846212.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain 11J360     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3060070..3070567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW889_RS14535 (MW889_14545) - 3063474..3064163 (-) 690 WP_006582561.1 hypothetical protein -
  MW889_RS14540 (MW889_14550) - 3064160..3065077 (-) 918 WP_006582560.1 PilW family protein -
  MW889_RS14545 (MW889_14555) pilV 3065070..3065567 (-) 498 WP_033846212.1 type IV pilus modification protein PilV Machinery gene
  MW889_RS14550 (MW889_14560) - 3065582..3066022 (-) 441 WP_025466883.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  MW889_RS14555 (MW889_14565) ispH 3066191..3067141 (-) 951 WP_006582557.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  MW889_RS14560 (MW889_14570) gmk 3067264..3067893 (+) 630 WP_006582556.1 guanylate kinase -
  MW889_RS14565 (MW889_14575) rpoZ 3067966..3068244 (+) 279 WP_000135049.1 DNA-directed RNA polymerase subunit omega -
  MW889_RS14570 (MW889_14580) - 3068283..3068414 (+) 132 WP_102990545.1 hypothetical protein -
  MW889_RS14575 (MW889_14585) - 3068453..3070558 (+) 2106 WP_004711681.1 HD domain-containing protein -

Sequence

Protein


Download         Length: 165 a.a.        Molecular weight: 17589.04 Da        Isoelectric Point: 5.0748

>NTDB_id=585392 MW889_RS14545 WP_033846212.1 3065070..3065567(-) (pilV) [Acinetobacter nosocomialis strain 11J360]
MITSQKGAGLMEVLVALLLLSVAVLGFIALQIRAVAASTEAGQNIQATNIARDLAERIRVNRTGLSSYVDIGGTDTLTDC
STTFCDAAQMAKYDYVQVKQHATDLGMSLAILNCKGFSLNRTRQCIYVAWGGTTATDGNGSPNCTNGTAYVPDAKCTIME
VYNYD

Nucleotide


Download         Length: 498 bp        

>NTDB_id=585392 MW889_RS14545 WP_033846212.1 3065070..3065567(-) (pilV) [Acinetobacter nosocomialis strain 11J360]
ATGATAACTTCTCAAAAAGGTGCTGGTTTAATGGAAGTGCTTGTTGCACTACTTTTATTGAGTGTTGCTGTACTTGGTTT
TATTGCTTTACAAATACGAGCAGTTGCTGCAAGTACTGAAGCAGGTCAGAACATTCAAGCAACCAATATTGCCCGAGATT
TAGCAGAGCGTATACGTGTGAATCGAACAGGTTTAAGTAGTTATGTGGATATTGGTGGCACTGACACATTAACAGACTGT
TCTACCACATTTTGTGATGCTGCTCAGATGGCGAAATACGATTATGTGCAGGTCAAACAACATGCTACAGATTTAGGTAT
GAGTCTTGCAATATTGAATTGTAAAGGTTTTTCATTAAATCGAACTCGTCAATGCATATATGTAGCATGGGGGGGTACAA
CAGCTACAGATGGTAATGGCAGTCCGAATTGTACTAATGGTACAGCCTATGTACCTGACGCAAAATGTACCATTATGGAG
GTTTATAATTATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Acinetobacter baumannii D1279779

38.983

100

0.418
  pilV Acinetobacter baylyi ADP1

36.364

100

0.388