Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | KU542_RS05535 | Genome accession | NZ_CP077893 |
| Coordinates | 1049795..1050094 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 332 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1044795..1055094
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU542_RS05495 (KU542_05500) | - | 1044856..1045059 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| KU542_RS05500 (KU542_05505) | - | 1045056..1046042 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| KU542_RS05505 (KU542_05510) | - | 1046042..1046371 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| KU542_RS05510 (KU542_05515) | - | 1046368..1046991 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| KU542_RS05515 (KU542_05520) | comGA | 1047043..1048017 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KU542_RS05520 (KU542_05525) | comGB | 1047989..1049059 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KU542_RS05525 (KU542_05530) | comGC | 1049073..1049384 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KU542_RS05530 (KU542_05535) | comGD | 1049362..1049808 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| KU542_RS05535 (KU542_05540) | comGE | 1049795..1050094 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| KU542_RS05540 (KU542_05545) | comGF | 1050012..1050509 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KU542_RS05545 (KU542_05550) | - | 1050606..1050752 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| KU542_RS05550 (KU542_05555) | - | 1050742..1051266 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| KU542_RS05555 (KU542_05560) | gcvT | 1051425..1052516 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KU542_RS05560 (KU542_05565) | gcvPA | 1052536..1053882 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=584658 KU542_RS05535 WP_000844413.1 1049795..1050094(+) (comGE) [Staphylococcus aureus strain 332]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=584658 KU542_RS05535 WP_000844413.1 1049795..1050094(+) (comGE) [Staphylococcus aureus strain 332]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |