Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KU500_RS00380 | Genome accession | NZ_CP077867 |
| Coordinates | 73205..74275 (+) | Length | 356 a.a. |
| NCBI ID | WP_000776407.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 367 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 68205..79275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU500_RS00350 (KU500_00350) | - | 68628..70091 (+) | 1464 | WP_001017869.1 | rhomboid family protein | - |
| KU500_RS00355 (KU500_00355) | - | 70072..70275 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| KU500_RS00360 (KU500_00360) | - | 70272..71258 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| KU500_RS00365 (KU500_00365) | - | 71258..71587 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| KU500_RS00370 (KU500_00370) | - | 71584..72207 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| KU500_RS00375 (KU500_00375) | comGA | 72259..73233 (+) | 975 | WP_000697218.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KU500_RS00380 (KU500_00380) | comGB | 73205..74275 (+) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KU500_RS00385 (KU500_00385) | comGC | 74289..74600 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KU500_RS00390 (KU500_00390) | comGD | 74578..75024 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| KU500_RS00395 (KU500_00395) | comGE | 75011..75310 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| KU500_RS00400 (KU500_00400) | comGF | 75228..75725 (+) | 498 | WP_001838632.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KU500_RS00405 (KU500_00405) | - | 75822..75968 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| KU500_RS00410 (KU500_00410) | - | 75958..76482 (+) | 525 | WP_001015116.1 | shikimate kinase | - |
| KU500_RS00415 (KU500_00415) | gcvT | 76641..77732 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KU500_RS00420 (KU500_00420) | gcvPA | 77752..79098 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41465.90 Da Isoelectric Point: 10.1030
>NTDB_id=584218 KU500_RS00380 WP_000776407.1 73205..74275(+) (comGB) [Staphylococcus aureus strain 367]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMAYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIMVSILAIIMKLFYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMAYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIMVSILAIIMKLFYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=584218 KU500_RS00380 WP_000776407.1 73205..74275(+) (comGB) [Staphylococcus aureus strain 367]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGGCATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATGGTATCTATATT
GGCTATTATTATGAAATTATTTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGTTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGGCATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATGGTATCTATATT
GGCTATTATTATGAAATTATTTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGTTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
98.596 |
100 |
0.986 |
| comGB | Staphylococcus aureus N315 |
98.596 |
100 |
0.986 |