Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   RVR_RS21150 Genome accession   NZ_AP018365
Coordinates   5006442..5007500 (-) Length   352 a.a.
NCBI ID   WP_202238862.1    Uniprot ID   -
Organism   Streptomyces sp. SN-593     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5001442..5012500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - disA 5006442..5007500 (-) 1059 - - Machinery gene

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38324.99 Da        Isoelectric Point: 4.9152

>NTDB_id=58250 RVR_RS21150 WP_202238862.1 5006442..5007500(-) (disA) [Streptomyces sp. SN-593]
MRASLSAVAPGTALRDGLERIVRGNTGGLIVLGMDKTVESLCTGGFVLDVEFTATRLRELCKLDGALILDKDITKILRAG
VQLVPDPTIPTEETGTRHRTADRVSRQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIAGVEPERELVARDYVPEPTAKRS
RTVAEALAELDALPQNELIELTTVARALGYTGSPESLDSAVSPRGYRLLAKVPRLPNTVIERLVEHFGGLQKLLAASVDD
LQAVEGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=58250 RVR_RS21150 WP_202238862.1 5006442..5007500(-) (disA) [Streptomyces sp. SN-593]
ATGCGTGCCTCGCTCAGCGCGGTCGCCCCGGGCACGGCCCTGCGGGACGGCCTGGAGCGGATCGTCCGCGGCAACACCGG
CGGTCTGATCGTCCTCGGCATGGACAAGACCGTCGAGTCGCTGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCG
CGACCCGGCTGCGCGAGCTGTGCAAGCTCGACGGCGCCCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGC
GTGCAACTCGTGCCGGACCCGACCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCAGCCGCCA
GGTCAACTTCCCCGTGGTGTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGGCAGCGCCGCGTGCTGG
AGGACTCCGCCGCGATCCTCTCCCGCGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTG
GCCGGCACGCTGTCGGCGCTGGAGATCGAGGACCTGGTGACGGTGCGCGATGTCACCGCCGTGGCCCAGCGGTTGGAGAT
GGTGCGCCGCATCGCCACCGAGATCGCCGAGTACGTCGTGGAGTTGGGCACCGACGGGCGCCTGCTCGCCCTCCAGCTCG
ACGAGTTGATCGCCGGTGTCGAGCCCGAGCGCGAGCTCGTCGCGCGCGACTACGTCCCCGAGCCGACCGCCAAGCGCAGC
CGTACCGTCGCCGAGGCGCTCGCCGAACTGGACGCGCTCCCGCAGAACGAGCTGATCGAACTGACCACGGTGGCCCGCGC
ACTGGGCTACACCGGCTCCCCCGAGTCGCTCGACTCCGCGGTCTCGCCGCGCGGTTACCGGCTGCTGGCGAAGGTGCCGC
GACTGCCCAACACCGTCATCGAGCGGCTGGTCGAGCACTTCGGCGGCCTTCAGAAGCTGCTGGCCGCCAGCGTGGACGAC
CTCCAGGCCGTCGAGGGCGTCGGCGAGGCGCGGGCGCGCTCGGTCCGCGAGGGCCTGTCCCGGCTGGCCGAGTCCTCGAT
CCTCGAACGGTACGTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.954

98.295

0.452


Multiple sequence alignment