Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MP619_RS10560 Genome accession   NZ_CP095081
Coordinates   2120679..2122388 (-) Length   569 a.a.
NCBI ID   WP_129556327.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2115679..2127388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS10540 (MP619_10510) radA 2116011..2117372 (-) 1362 WP_129556330.1 DNA repair protein RadA Machinery gene
  MP619_RS10545 (MP619_10515) - 2117455..2117901 (-) 447 WP_129556329.1 dUTP diphosphatase -
  MP619_RS10550 (MP619_10520) - 2118009..2118776 (-) 768 WP_015058074.1 epoxyqueuosine reductase QueH -
  MP619_RS10555 (MP619_10525) - 2118895..2120679 (-) 1785 WP_129556328.1 ABC transporter ATP-binding protein -
  MP619_RS10560 (MP619_10530) rcrP 2120679..2122388 (-) 1710 WP_129556327.1 ABC transporter ATP-binding protein Regulator
  MP619_RS10565 (MP619_10535) rcrR 2122381..2122830 (-) 450 WP_129556326.1 MarR family transcriptional regulator Regulator
  MP619_RS10570 (MP619_10540) - 2123031..2124047 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  MP619_RS10575 (MP619_10545) hasC 2124079..2124981 (+) 903 WP_129556325.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  MP619_RS10580 (MP619_10550) - 2125162..2125602 (+) 441 WP_268227772.1 hypothetical protein -
  MP619_RS10590 (MP619_10560) - 2126776..2127009 (+) 234 Protein_2034 hypothetical protein -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63325.00 Da        Isoelectric Point: 5.9536

>NTDB_id=581879 MP619_RS10560 WP_129556327.1 2120679..2122388(-) (rcrP) [Streptococcus dysgalactiae strain WJ001]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLNTEPAMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=581879 MP619_RS10560 WP_129556327.1 2120679..2122388(-) (rcrP) [Streptococcus dysgalactiae strain WJ001]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCCCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGAATGACCAATGACATTAACCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTCCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTGATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAATTATTAGATTTGAATCTCTTTATCGGATACGGTTTTTCGTTGATGCAACCTGCTTTG
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCTATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTTATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTCGGCTTTATGGGGATGCAAGCTA
GTCGTGCCTTTGTCTCTATTGGTCGTCTTAAAGAGGTGCTCAATACTGAGCCAGCCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACCTACCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCAATTAAATCTTTAAGTCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAAAGAGCAGCACGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGATCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGGATGTCGATTGCGCGTGGTGTCATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATTATTGCCCAAAAGATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.746

100

0.36