Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   MP619_RS10055 Genome accession   NZ_CP095081
Coordinates   2015106..2017442 (-) Length   778 a.a.
NCBI ID   WP_129556238.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2010106..2022442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS10035 (MP619_10005) rpsF 2010230..2010520 (-) 291 WP_002983117.1 30S ribosomal protein S6 -
  MP619_RS11625 - 2011478..2011771 (-) 294 WP_003052683.1 hypothetical protein -
  MP619_RS10040 (MP619_10010) mutY 2011938..2013104 (+) 1167 WP_129556236.1 A/G-specific adenine glycosylase -
  MP619_RS10045 (MP619_10015) trxA 2013154..2013468 (-) 315 WP_003052691.1 thioredoxin -
  MP619_RS10050 (MP619_10020) - 2013695..2015014 (+) 1320 WP_129556237.1 FAD-containing oxidoreductase -
  MP619_RS10055 (MP619_10025) mutS/mutS2 2015106..2017442 (-) 2337 WP_129556238.1 endonuclease MutS2 Machinery gene
  MP619_RS10060 (MP619_10030) - 2017598..2018143 (-) 546 WP_129556239.1 CvpA family protein -
  MP619_RS10065 (MP619_10035) - 2018146..2018454 (-) 309 WP_003052702.1 hypothetical protein -
  MP619_RS10070 (MP619_10040) rnhC 2018611..2019519 (+) 909 WP_129556240.1 ribonuclease HIII -
  MP619_RS10075 (MP619_10045) lepB 2019531..2020124 (+) 594 WP_012767541.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87103.70 Da        Isoelectric Point: 6.7696

>NTDB_id=581871 MP619_RS10055 WP_129556238.1 2015106..2017442(-) (mutS/mutS2) [Streptococcus dysgalactiae strain WJ001]
MDKKILEQLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGSLSDISASMRRLEL
EADLSIPELLAVKKILQVSAEASRFYVDLENVQLQALKRLFENLELFPSLQGSLQAINDGGFVESFASPELEKIRRSISD
KEHASRNVLQDLLKKQGDYLSESLIASRNGRSVLPVKNTFRNKVAGVVHDISASGNTVYIEPRALVQLNEELTQLQADER
HEVSRVLQALSDLVRPHSRVLTNNAWILGHLDFVRAKYLYMRDNKATVPAISDDKSLQLLNVRHPLLQEPVANDLYFSKD
LAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFADIGDEQSIEQSLSTFSSHMTHIVAILNQAD
ADSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPG
RSNAFEIARRLGLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKRLDHIREVEQDNLKFNRAVKKLYNEFSQAKDKE
IEKATLEAREIVDLALAESDSILNQLHDKAALKPHEVIEAKGQLKQLVPEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYG
QRGTLVKELKDKKWEAQVGLIKMTLKEDEFSLVKVVEEVQKPKKKAINVVKKAATGGGPRARLDLRGKRYEEAMQELDAF
IDQALLNNMSQVDIIHGIGTGVIREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=581871 MP619_RS10055 WP_129556238.1 2015106..2017442(-) (mutS/mutS2) [Streptococcus dysgalactiae strain WJ001]
ATGGATAAAAAGATTTTAGAACAGTTAGAATTTGATAAGGTCAAAGAACAATTTCGGGCCTACCTGCAGACCGAGCAGGG
GAACCGTGAATTAGACCAACTTGAACCCCTCAATCATCATGACAAAATCAAACATTACTTTTTAGAAATTGAAGAGATGG
CTGGCATTTTTGTAGAGCAACATCACTTTGCATTGGGCAGTCTGTCTGACATTTCAGCTAGCATGAGACGTTTGGAACTG
GAAGCTGATTTGAGCATTCCCGAATTATTAGCAGTCAAAAAAATACTTCAGGTATCAGCAGAAGCGAGTCGCTTTTATGT
TGATTTGGAAAACGTTCAGCTGCAAGCCTTGAAGCGTTTGTTTGAAAATCTGGAGCTTTTTCCTAGCCTTCAAGGCAGTC
TTCAGGCTATTAATGACGGTGGTTTTGTGGAAAGTTTTGCCAGTCCCGAGTTAGAAAAAATTCGTCGTAGCATCTCAGAC
AAAGAACATGCGAGCCGGAATGTCTTACAAGATTTACTCAAAAAGCAAGGTGACTATTTGTCAGAAAGCTTGATTGCTAG
CCGAAACGGGCGTAGTGTCTTACCTGTCAAAAACACCTTCCGTAATAAGGTGGCAGGGGTCGTTCACGATATTTCGGCTT
CAGGAAATACGGTTTATATTGAACCACGAGCTCTTGTTCAGCTAAATGAAGAGCTGACGCAGTTACAAGCCGACGAACGC
CATGAAGTGTCACGTGTCCTTCAAGCCCTATCTGACCTTGTCAGACCTCATAGTCGAGTTCTTACCAATAATGCTTGGAT
TCTGGGGCATCTGGATTTTGTCAGAGCCAAATACCTCTATATGAGAGATAATAAGGCCACGGTCCCGGCTATTTCGGATG
ATAAAAGTTTACAGTTGTTAAATGTGCGCCACCCTCTTTTGCAGGAGCCAGTTGCTAATGATTTGTATTTCTCTAAAGAT
TTGGCTGTTATTGTGATTACTGGTCCGAATACTGGTGGTAAAACCATCATGCTAAAAACCCTTGGCTTAGCCCAGCTAAT
GGCCCAATCGGGTCTGCCTATTCTCGCAGATAAAGGTTCTAAAGTTGCTGTTTTTAGTGGTATTTTTGCTGACATTGGCG
ATGAACAATCCATTGAGCAGAGCTTATCAACTTTCTCTAGCCATATGACTCATATTGTTGCTATTTTGAATCAAGCTGAT
GCAGACAGTTTAGTACTCTTTGATGAGCTTGGGGCAGGAACAGATCCGCAAGAAGGAGCAAGTCTTGCTATGGCAATCTT
GGAGCAGTTACGCTTGACTAATATCAAAACCATGGCGACTACCCATTACCCTGAACTAAAAGCATATGGCATCGAAACCC
CCTATGTGGAAAATGCCAGTATGGAGTTCGATAGCATGAGTTTAAAACCAACTTACCGCTTTATGCAGGGAGTTCCAGGT
CGTTCAAATGCCTTTGAAATTGCTAGACGCCTTGGGTTGGCAGAGCACATTGTCAAAGAAGCTCAAAACATGACAGACAC
AGATAGTGATGTTAACCGTATTATCGAACAGTTAGAGAAACAAACTCTGGAGAGTCGTAAGCGGCTTGATCATATTCGAG
AAGTGGAGCAAGATAACCTCAAATTTAACCGTGCTGTTAAAAAATTGTACAATGAGTTCTCACAGGCCAAAGATAAGGAA
ATTGAAAAAGCTACCCTTGAAGCGCGTGAGATCGTAGACTTAGCTTTAGCAGAAAGTGACAGTATTTTAAACCAGTTGCA
TGACAAAGCTGCACTTAAACCTCACGAAGTTATTGAAGCCAAGGGGCAACTCAAACAGTTAGTGCCAGAAAAGAGTCTCT
CTCAAAACAAGGTCCTAAAGAAAGCGAAGCAATTACGAGCTCCTCGAGTAGGAGACGATATTATTGTAACAGCCTATGGC
CAAAGAGGAACTTTGGTAAAAGAGCTCAAAGATAAGAAGTGGGAAGCGCAAGTTGGACTGATCAAAATGACCCTCAAAGA
AGATGAATTTAGTCTTGTGAAGGTTGTTGAGGAAGTTCAAAAACCAAAGAAAAAAGCCATCAACGTGGTCAAGAAGGCTG
CTACTGGTGGTGGTCCTCGTGCCCGTCTGGATTTGCGTGGCAAACGGTATGAAGAAGCGATGCAAGAACTAGACGCCTTT
ATTGACCAAGCTCTCTTAAATAATATGAGCCAAGTGGATATTATTCATGGGATTGGCACTGGTGTAATCCGTGAAGCTGT
TACCAAATACCTCAGACGAAACAAACATGTTAAAAGCTTTGGTTATGCTCCACAGAATGCGGGTGGATCAGGGTGTACCA
TTGCGAACTTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.38

100

0.41