Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MP619_RS06930 Genome accession   NZ_CP095081
Coordinates   1355818..1357563 (-) Length   581 a.a.
NCBI ID   WP_129555815.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain WJ001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1350818..1362563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP619_RS11590 - 1351721..1351783 (+) 63 WP_281429797.1 hypothetical protein -
  MP619_RS06915 (MP619_06885) - 1351971..1352381 (-) 411 WP_012766836.1 peptide deformylase -
  MP619_RS06920 (MP619_06890) gdhA 1352506..1353855 (-) 1350 WP_129555813.1 NADP-specific glutamate dehydrogenase -
  MP619_RS06925 (MP619_06895) rcrQ 1354046..1355818 (-) 1773 WP_129555814.1 ABC transporter ATP-binding protein Regulator
  MP619_RS06930 (MP619_06900) rcrP 1355818..1357563 (-) 1746 WP_129555815.1 ABC transporter ATP-binding protein Regulator
  MP619_RS06935 (MP619_06905) - 1357671..1359548 (-) 1878 WP_129555816.1 ABC-F family ATP-binding cassette domain-containing protein -
  MP619_RS06940 (MP619_06910) - 1359545..1360753 (-) 1209 WP_172595984.1 CCA tRNA nucleotidyltransferase -
  MP619_RS06945 (MP619_06915) - 1360873..1361721 (-) 849 WP_129555817.1 DegV family protein -
  MP619_RS06950 (MP619_06920) - 1361721..1362101 (-) 381 WP_003050280.1 DUF1149 family protein -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65172.81 Da        Isoelectric Point: 5.5988

>NTDB_id=581848 MP619_RS06930 WP_129555815.1 1355818..1357563(-) (rcrP) [Streptococcus dysgalactiae strain WJ001]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDQGIMQQDTKALYGWTLVMFVIIVLGVLGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLAWIVA
VSMPFLVLVVVYVAVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYAGISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSKRIKEVMDMPISISKNE
DGVTETLTKGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YQLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEDATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEEEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=581848 MP619_RS06930 WP_129555815.1 1355818..1357563(-) (rcrP) [Streptococcus dysgalactiae strain WJ001]
ATGGGGCTGATTTGGTCGTATTTATCATCAAAGCCTAAGTGGTTGGCTTTGGACATTTTAGGTGGTCTATTATTTGTTCT
GGTTAATTTAGGATTGCCTACTATTTTAGCTCGGATGATAGACCAAGGAATCATGCAGCAGGATACCAAAGCCTTATATG
GCTGGACGTTGGTCATGTTTGTCATTATTGTGTTAGGTGTTCTTGGTCGAATTATCTTATCCTATGCATCTGGTAAGTTA
ACGACAACCATGATCAAGGAGTTGCGCAATGACATGTATCGTCAGTTGCAAGATTACTCTCATACAGAGTATGAAAAAAT
TGGGGTTGCTTCTTTGGTTACCCGAATGACAAGTGATGCCTTTGTGCTCATGCAGTTTGCTGAAATGTCTTTACGTTTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGCATGGATTGTAGCG
GTATCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTCGCCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TTTAGACCACATTAATCAGCTAGTCAGAGAAAATTTGACTGGCTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCGTTTC
AACAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCGGCATTTCTAAACGTCTCTTCACCTTAACAGGATTGACAGAA
CCACTATTTGTGCAAATCATTATTGCCATGATTGTAGCTATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCCCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACTTTGACAAAAGGTTACCTCGAATTTGACAATGTCACCTTTGCCTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGTGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGGAAAT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCAGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAGAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTGTCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACCCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAACAACGGCTATCC
ATTGCCCGTGCGGTTGTTAAAAAACCCGATATTTATATCTTTGATGATTCTTTTTCGGCACTAGATTACCAAACTGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGATGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATCGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAGAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(26-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.962

91.738

0.367