Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MTR79_RS27150 Genome accession   NZ_CP094918
Coordinates   6005554..6007287 (+) Length   577 a.a.
NCBI ID   WP_244792152.1    Uniprot ID   -
Organism   Streptomyces sp. BJ20     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6000554..6012287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTR79_RS27110 - 6000837..6001874 (+) 1038 WP_048457566.1 rod shape-determining protein -
  MTR79_RS27115 - 6002113..6002784 (+) 672 WP_189365953.1 ANTAR domain-containing protein -
  MTR79_RS27120 - 6002851..6003021 (+) 171 WP_189365952.1 hypothetical protein -
  MTR79_RS27140 - 6003635..6003940 (+) 306 WP_048457702.1 hypothetical protein -
  MTR79_RS27145 - 6003979..6005430 (+) 1452 WP_078895094.1 FGGY family carbohydrate kinase -
  MTR79_RS27150 rcrP 6005554..6007287 (+) 1734 WP_244792152.1 ABC transporter ATP-binding protein Regulator
  MTR79_RS27155 rcrQ 6007287..6009215 (+) 1929 WP_244792153.1 ABC transporter ATP-binding protein Regulator
  MTR79_RS27160 - 6009264..6010556 (-) 1293 WP_086704288.1 RNA polymerase sigma factor -
  MTR79_RS27165 - 6010659..6011315 (+) 657 WP_244792154.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62519.52 Da        Isoelectric Point: 6.1281

>NTDB_id=581029 MTR79_RS27150 WP_244792152.1 6005554..6007287(+) (rcrP) [Streptomyces sp. BJ20]
MLIRLLRDRLRPYKRSLALLVLLQFLQTCATLYLPTLNAGIIDNGVVQGDTGYILGYGGLMIGISLAQVVCNVGAVYYGA
RTAAALGRDLRAAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQIQMLTLMTFTLMVSAPIMCVGGVVLALGLDVPLSGV
LVAVVPVLGVCVTLIVRRLRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDTYEQRRFHGSNTELTDVSLRAGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERVQEVLDTSSSVVP
PAAPVTELRRHGHLEIRGAGFRYPGAEEPVLRAVDLVARPGEVTAVIGSTGSGKSTLLGLVPRLFDATEGEVLVDGVPVA
DVDPPLLARTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQGRDFVERLEGGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAEATVVIVAQRVATIRDADRIVVLDEGRVVGAGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=581029 MTR79_RS27150 WP_244792152.1 6005554..6007287(+) (rcrP) [Streptomyces sp. BJ20]
GTGCTCATACGACTTCTACGTGACCGTCTACGGCCCTACAAGAGATCCCTCGCCCTGCTGGTGCTCCTGCAGTTCCTGCA
GACCTGCGCCACGCTCTACCTGCCCACGCTGAACGCGGGCATCATCGACAACGGTGTCGTCCAGGGTGACACGGGTTACA
TCCTGGGCTACGGCGGACTGATGATCGGCATCTCGCTGGCGCAGGTCGTCTGCAACGTCGGCGCCGTGTACTACGGGGCC
CGGACCGCGGCGGCCCTGGGGCGGGACCTGCGCGCCGCGGTGTTCGACCGGGTGCAGTCCTTCTCCGCCCGTGAGGTCGG
TCACTTCGGGGCGCCGTCGCTGATCACGCGGACGACGAACGACGTCCAGCAGATCCAGATGCTCACCCTGATGACGTTCA
CCCTCATGGTGTCGGCGCCGATCATGTGCGTGGGCGGTGTGGTGCTGGCGCTCGGTCTGGACGTGCCGCTGTCCGGGGTG
CTGGTCGCGGTGGTGCCCGTGCTGGGCGTCTGCGTGACACTGATCGTGCGCCGGCTGCGGCCGCTGTTCCGCACCATGCA
GGAGCGCCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTCATCCGCGCGTTCGTGCGGGACA
CGTACGAGCAGCGGCGGTTCCACGGGTCCAACACCGAGCTGACCGACGTGTCACTGCGCGCCGGCAATCTGCTCGCGCTG
ATGTTCCCGGTGGTCATGACGGTGGTGAACCTGTCGTCGATCGCGGTGGTGTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACGGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACGTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCGTCCAGGAGGTGCTGGACACCTCCTCGAGCGTGGTGCCG
CCGGCCGCGCCCGTCACCGAGCTGCGCCGGCACGGACACCTGGAGATCCGGGGCGCGGGTTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGCGGGCGGTCGACCTGGTGGCGCGGCCCGGCGAGGTCACCGCCGTCATCGGCTCCACCGGCAGCGGCA
AGTCCACGCTGCTGGGGCTGGTGCCGCGGCTGTTCGACGCCACCGAGGGCGAGGTGCTGGTCGACGGGGTGCCGGTGGCG
GACGTCGACCCGCCGCTGCTCGCCCGGACCGTCGGCCTGGTGCCGCAGAAGCCGTACCTGTTCGCGGGCACGGTGGCCAC
CAATCTGCGCTACGGCAATCCGGACGCCACGGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGGCAGGGACTTCG
TGGAGCGGCTGGAGGGCGGGCTCGACGCACCGATCGCGCAGGGCGGGACGAACGTCTCCGGCGGTCAGCGCCAGCGCCTG
GCCATCGCCCGGACGTTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGCCACCGA
CGCGGCCCTGCGCGCGGCGCTCGCGCGGGAGACGGCCGAGGCGACGGTGGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCGTGGTGCTGGACGAGGGCCGGGTGGTCGGCGCCGGCCGGCACCACGAGCTGATGGCGGACAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCGGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(352-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.793

100

0.39