Detailed information NTG0058038

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: SPN034156_RS05790
• Genome accession: NC_021006
• Coordinates: 1074998..1075660 (-)
• Length: 220 a.a.
• NCBI ID: WP_000649964.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae SPN034156
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1069998..1080660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN034156_RS05765 (SPN034156_10240)	-	1070148..1070414 (-)	267	WP_001278167.1	Veg family protein	-
SPN034156_RS05770 (SPN034156_10250)	dnaB	1070416..1071768 (-)	1353	WP_000852486.1	replicative DNA helicase	-
SPN034156_RS05775 (SPN034156_10260)	rplI	1071812..1072264 (-)	453	WP_000864220.1	50S ribosomal protein L9	-
SPN034156_RS05780 (SPN034156_10270)	-	1072261..1074234 (-)	1974	WP_000715121.1	DHH family phosphoesterase	-
SPN034156_RS05785 (SPN034156_10280)	raiA	1074370..1074918 (-)	549	WP_000599107.1	ribosome-associated translation inhibitor RaiA	-
SPN034156_RS05790 (SPN034156_10290)	comFC/cflB	1074998..1075660 (-)	663	WP_000649964.1	ComF family protein	Machinery gene
SPN034156_RS05795 (SPN034156_10300)	comFA/cflA	1075657..1076955 (-)	1299	WP_000867612.1	DEAD/DEAH box helicase	Machinery gene
SPN034156_RS05800 (SPN034156_10310)	-	1077011..1077646 (+)	636	WP_015511362.1	YigZ family protein	-
SPN034156_RS05805 (SPN034156_10320)	cysK	1077931..1078851 (+)	921	WP_000029867.1	cysteine synthase A	-
SPN034156_RS05810 (SPN034156_10330)	-	1079090..1079455 (-)	366	Protein_1069	IS66 family transposase	-
SPN034156_RS05815 (SPN034156_10340)	-	1079437..1079724 (+)	288	Protein_1070	transposase	-
SPN034156_RS05820 (SPN034156_10350)	tnpB	1079879..1080202 (-)	324	WP_000973415.1	IS66 family insertion sequence element accessory protein TnpB	-

Sequence

Protein

• Length: 220 a.a.
• Molecular weight: 25253.15 Da
• Isoelectric Point: 7.3688

>NTDB_id=58038 SPN034156_RS05790 WP_000649964.1 1074998..1075660(-) (comFC/cflB) [Streptococcus pneumoniae SPN034156]
MKCLLCGQTMKTVLTFSSLLLLRNDDSCLCSDCDSTFERIGEENCPNCMKTELSIKCQDCQLWCKEGVEVSHRAIFTYNQ
AMKDFFSRYKFDGDFLLRKVFASFLSEELKKYKEYQFVVIPLSPDRYANRGFNQVEGLVEAAGFEYLDLLEKREERASSS
KNRSERLGTELPFFIKSGVTIPKKILLIDDIYTTGATINRVKKLLEEAGAKDVKTFSLVR

Nucleotide

• Length: 663 bp

>NTDB_id=58038 SPN034156_RS05790 WP_000649964.1 1074998..1075660(-) (comFC/cflB) [Streptococcus pneumoniae SPN034156]
ATGAAGTGCTTGTTATGTGGGCAGACTATGAAGACTGTTTTAACTTTTAGTAGTCTCTTACTTCTGAGGAATGATGACTC
TTGTCTTTGTTCAGACTGTGATTCTACTTTTGAAAGAATTGGGGAAGAGAACTGTCCAAATTGTATGAAAACAGAGTTGT
CAATAAAGTGTCAAGATTGTCAACTTTGGTGTAAAGAGGGAGTTGAAGTCAGTCATAGAGCGATTTTTACTTACAATCAA
GCTATGAAGGATTTTTTCAGTCGGTATAAGTTTGATGGAGACTTCCTGTTAAGAAAAGTTTTCGCTTCATTTTTAAGTGA
GGAGTTGAAAAAGTACAAAGAGTATCAATTTGTTGTAATTCCCCTAAGTCCTGATAGATATGCTAATAGAGGATTTAATC
AGGTTGAGGGCTTGGTAGAGGCAGCAGGCTTTGAGTATCTGGATTTATTAGAGAAAAGAGAAGAGAGAGCCAGTTCTTCT
AAAAATCGTTCAGAGCGCTTGGGGACAGAACTTCCTTTCTTTATTAAAAGTGGAGTCACTATTCCTAAAAAAATCCTACT
TATAGATGATATCTATACTACAGGAGCAACTATAAATCGTGTTAAGAAACTGTTGGAAGAAGCTGGTGCTAAGGATGTAA
AAACATTTTCCCTTGTAAGATGA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (153-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus pneumoniae TIGR4	99.545	100	0.995
comFC/cflB	Streptococcus pneumoniae Rx1	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae D39	99.091	100	0.991
comFC/cflB	Streptococcus pneumoniae R6	99.091	100	0.991
comFC/cflB	Streptococcus mitis NCTC 12261	91.818	100	0.918
comFC/cflB	Streptococcus mitis SK321	90.909	100	0.909