Detailed information NTG0578096

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: L6J92_RS24160
• Genome accession: NZ_CP094676
• Coordinates: 5709835..5711190 (-)
• Length: 451 a.a.
• NCBI ID: WP_194278415.1
• Uniprot ID: -
• Organism: Streptomyces sp. CB09030
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5704835..5716190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6J92_RS24140 (L6J92_24140)	-	5705719..5706075 (-)	357	WP_031035736.1	hypothetical protein	-
L6J92_RS24145 (L6J92_24145)	-	5706083..5706532 (-)	450	WP_194278417.1	DUF948 domain-containing protein	-
L6J92_RS24150 (L6J92_24150)	-	5706711..5708897 (+)	2187	WP_224293802.1	AAA family ATPase	-
L6J92_RS24155 (L6J92_24155)	rpsD	5708925..5709539 (-)	615	WP_031035730.1	30S ribosomal protein S4	-
L6J92_RS24160 (L6J92_24160)	rarA	5709835..5711190 (-)	1356	WP_194278415.1	replication-associated recombination protein A	Machinery gene
L6J92_RS24165 (L6J92_24165)	-	5711272..5711934 (-)	663	WP_195887251.1	vitamin K epoxide reductase family protein	-
L6J92_RS24170 (L6J92_24170)	hisS	5712126..5713388 (-)	1263	WP_031035725.1	histidine--tRNA ligase	-
L6J92_RS24175 (L6J92_24175)	-	5713402..5714109 (-)	708	WP_037765203.1	MBL fold metallo-hydrolase	-
L6J92_RS24180 (L6J92_24180)	-	5714294..5715145 (+)	852	WP_195887249.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 47995.31 Da
• Isoelectric Point: 6.5736

>NTDB_id=578096 L6J92_RS24160 WP_194278415.1 5709835..5711190(-) (rarA) [Streptomyces sp. CB09030]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGSGPAGPSSVFLWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRGLLRRALAAERGLGGAVALPGDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALDDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDELKERTYYTPTRHGAEARYADAVEWTRGHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=578096 L6J92_RS24160 WP_194278415.1 5709835..5711190(-) (rarA) [Streptomyces sp. CB09030]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGACCGGCAGTCCCCTCGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGCCGCCTGGTCGGCG
AGGGCGGCTCCGGGCCCGCCGGCCCCTCCTCGGTCTTCCTCTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCGGCCATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCGGTCGGGGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACGTGCGCGGCCTGCT
CCGCCGGGCCCTCGCCGCCGAGCGCGGGCTGGGCGGGGCCGTCGCCCTGCCCGGGGACACCGAGGAGCACCTGCTGCGCA
TCGCGGGCGGTGACGCCCGCCGGGCCCTGACCGCGCTCGAGGCCGCCGCCGGGGCCGCGCTCGACAAGGGCGAGACGGAG
ATCGGCCTGACCACGCTGGAGGAGACGGTCGACCGGGCCGCGGTCAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGTGCCCTGATCAAGTCCATCCGCGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCGCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCGCTG
CCGACCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTCGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGACGACGTGCGCAAGGGCCACG
CCGGACCGGTCCCCGCGCACCTGCGCGACAGCCACTACAAGGGCGCCGGCAAGCTCGGGCACGGGCAGGGGTACGTGTAC
CCGCACGACCTGCCGGAGGGCATCGCCGCCCAGCAGTACGCCCCGGACGAGCTGAAGGAGCGGACGTACTACACGCCGAC
CCGGCACGGCGCCGAGGCCCGGTACGCGGACGCGGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424