Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   KPL75_RS14255 Genome accession   NZ_CP076653
Coordinates   2711457..2711741 (-) Length   94 a.a.
NCBI ID   WP_000843037.1    Uniprot ID   A0A366FUU6
Organism   Bacillus sp. NP247     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 2706457..2716741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPL75_RS14220 (KPL75_14215) tmk 2706611..2707237 (+) 627 WP_219916789.1 dTMP kinase -
  KPL75_RS14225 (KPL75_14220) holB 2707273..2708256 (+) 984 WP_113938530.1 DNA polymerase III subunit delta' -
  KPL75_RS14230 (KPL75_14225) - 2708262..2709089 (+) 828 WP_219916790.1 stage 0 sporulation family protein -
  KPL75_RS14235 (KPL75_14230) yabA 2709104..2709454 (+) 351 WP_002009639.1 DNA replication initiation control protein YabA -
  KPL75_RS14240 (KPL75_14235) - 2709575..2710315 (+) 741 WP_219916791.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  KPL75_RS14245 (KPL75_14240) - 2710302..2710592 (+) 291 WP_219916792.1 GIY-YIG nuclease family protein -
  KPL75_RS14250 (KPL75_14245) rsmI 2710561..2711436 (+) 876 WP_219916793.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  KPL75_RS14255 (KPL75_14250) abrB 2711457..2711741 (-) 285 WP_000843037.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  KPL75_RS14260 (KPL75_14255) metG 2712262..2714244 (+) 1983 WP_258236929.1 methionine--tRNA ligase -
  KPL75_RS14265 (KPL75_14260) - 2714411..2715178 (+) 768 WP_219916795.1 TatD family hydrolase -
  KPL75_RS14270 (KPL75_14265) rnmV 2715439..2715996 (+) 558 WP_048562636.1 ribonuclease M5 -

Sequence

Protein


Download         Length: 94 a.a.        Molecular weight: 10476.14 Da        Isoelectric Point: 4.7174

>NTDB_id=577005 KPL75_RS14255 WP_000843037.1 2711457..2711741(-) (abrB) [Bacillus sp. NP247]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK

Nucleotide


Download         Length: 285 bp        

>NTDB_id=577005 KPL75_RS14255 WP_000843037.1 2711457..2711741(-) (abrB) [Bacillus sp. NP247]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGACGAAAAAATCATCTTAAAGAAATATAAGCCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACTTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAGGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-89)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-50)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366FUU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

84.043

100

0.84