Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | KQH81_RS07100 | Genome accession | NZ_CP076620 |
| Coordinates | 1527915..1529756 (+) | Length | 613 a.a. |
| NCBI ID | WP_027638011.1 | Uniprot ID | A0A1I2MQH4 |
| Organism | Clostridium cadaveris strain IFB3C5 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1512213..1533028 | 1527915..1529756 | within | 0 |
Gene organization within MGE regions
Location: 1512213..1533028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH81_RS06990 (KQH81_06970) | - | 1512213..1513379 (-) | 1167 | WP_230029136.1 | site-specific integrase | - |
| KQH81_RS06995 (KQH81_06975) | - | 1513471..1514043 (-) | 573 | WP_230029137.1 | Uma2 family endonuclease | - |
| KQH81_RS07000 (KQH81_06980) | - | 1514058..1514534 (-) | 477 | WP_230029138.1 | helix-turn-helix domain-containing protein | - |
| KQH81_RS07005 (KQH81_06985) | - | 1514699..1514902 (+) | 204 | WP_230029139.1 | helix-turn-helix transcriptional regulator | - |
| KQH81_RS07010 (KQH81_06990) | - | 1514960..1515244 (+) | 285 | WP_230029140.1 | helix-turn-helix domain-containing protein | - |
| KQH81_RS07015 (KQH81_06995) | - | 1515413..1515670 (+) | 258 | WP_230028620.1 | hypothetical protein | - |
| KQH81_RS07020 (KQH81_07000) | - | 1515809..1515991 (+) | 183 | WP_230029142.1 | hypothetical protein | - |
| KQH81_RS07025 (KQH81_07005) | - | 1516137..1518512 (+) | 2376 | WP_230029143.1 | virulence-associated E family protein | - |
| KQH81_RS07030 (KQH81_07010) | - | 1518924..1519112 (+) | 189 | WP_230029144.1 | hypothetical protein | - |
| KQH81_RS07035 (KQH81_07015) | - | 1519277..1519594 (+) | 318 | WP_230029145.1 | hypothetical protein | - |
| KQH81_RS07040 (KQH81_07020) | - | 1519606..1519758 (+) | 153 | WP_230029146.1 | hypothetical protein | - |
| KQH81_RS07045 (KQH81_07025) | - | 1519771..1520571 (+) | 801 | WP_230028630.1 | hypothetical protein | - |
| KQH81_RS07050 (KQH81_07030) | - | 1520791..1521006 (+) | 216 | WP_230028632.1 | cold-shock protein | - |
| KQH81_RS07055 (KQH81_07035) | - | 1521007..1521630 (+) | 624 | WP_230028634.1 | hypothetical protein | - |
| KQH81_RS07060 (KQH81_07040) | - | 1521756..1521968 (+) | 213 | WP_230028637.1 | hypothetical protein | - |
| KQH81_RS07065 (KQH81_07045) | - | 1521958..1522209 (+) | 252 | WP_230028638.1 | hypothetical protein | - |
| KQH81_RS07070 (KQH81_07050) | - | 1522300..1522647 (+) | 348 | WP_230028640.1 | DNA-binding response regulator | - |
| KQH81_RS07075 (KQH81_07055) | - | 1522842..1523591 (+) | 750 | WP_230029147.1 | sigma-70 family RNA polymerase sigma factor | - |
| KQH81_RS07080 (KQH81_07060) | - | 1523664..1524101 (+) | 438 | WP_230029149.1 | hypothetical protein | - |
| KQH81_RS07085 | - | 1524571..1524714 (+) | 144 | WP_230029150.1 | transposase | - |
| KQH81_RS07090 (KQH81_07070) | - | 1525202..1525684 (+) | 483 | WP_027638009.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| KQH81_RS07095 (KQH81_07075) | - | 1525700..1527922 (+) | 2223 | WP_027638010.1 | ABC transporter ATP-binding protein | - |
| KQH81_RS07100 (KQH81_07080) | rcrQ | 1527915..1529756 (+) | 1842 | WP_027638011.1 | ABC transporter ATP-binding protein | Regulator |
| KQH81_RS07105 (KQH81_07085) | - | 1529882..1530343 (+) | 462 | WP_027638012.1 | dUTP diphosphatase | - |
| KQH81_RS07110 (KQH81_07090) | - | 1530499..1531113 (+) | 615 | WP_143750466.1 | hypothetical protein | - |
| KQH81_RS07115 (KQH81_07095) | ruvA | 1531385..1531987 (+) | 603 | WP_027638014.1 | Holliday junction branch migration protein RuvA | - |
| KQH81_RS07120 (KQH81_07100) | ruvB | 1532000..1533028 (+) | 1029 | WP_027638015.1 | Holliday junction branch migration DNA helicase RuvB | - |
Sequence
Protein
Download Length: 613 a.a. Molecular weight: 68167.05 Da Isoelectric Point: 6.5207
>NTDB_id=576679 KQH81_RS07100 WP_027638011.1 1527915..1529756(+) (rcrQ) [Clostridium cadaveris strain IFB3C5]
MSKKEFGGPMGRGMRGPGEKAKDFKGTMKKLFKYISSFKIAIFGVILFAIGSAAFSIIGPKILGKATTEIFNGLVSKVSG
SGNGIDFDKIGKILLFLLGLYIISAIFSFIQGIIMSGISQKIAYNLRRDLSEKINRMPMKYFDTKTHGEVLSRFTNDIDT
LGQSLNQSMTQLITSITMIIGVLIMMLSISIPMTLVALLMLPISLGLIMTIVKKSQKYFKDQQKFLGNVNGQVEELYGGH
VIVKAFNGEEKSIEEFNKTNEKLYGSAWKSQFLSGMMQPIMMFIGNLGYVAVSIMGGWLVIKNTIEVGDIQSFIQYVRSF
TQPITQVAQVTNLLQSTAAAAERVFEFLEEDEEDQTVPNPVSVEGLDGRVDFNDVHFGYDENKTIINDFTAHVKPGQKIA
IVGPTGAGKTTMIKLLMRFYDVNSGEILIDGHNVKDFNRTELREMFGMVLQDTWLFNGTIMDNIRYGRLNATDEEVIEAA
KAAHVHHFVKTLPDGYKMELNEEGTNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLIQKAMDNLMKGRTSFI
IAHRLSTIRDADLILVMNEGDIVEQGNHEELLAKGGFYAKLYNSQFERSEEAV
MSKKEFGGPMGRGMRGPGEKAKDFKGTMKKLFKYISSFKIAIFGVILFAIGSAAFSIIGPKILGKATTEIFNGLVSKVSG
SGNGIDFDKIGKILLFLLGLYIISAIFSFIQGIIMSGISQKIAYNLRRDLSEKINRMPMKYFDTKTHGEVLSRFTNDIDT
LGQSLNQSMTQLITSITMIIGVLIMMLSISIPMTLVALLMLPISLGLIMTIVKKSQKYFKDQQKFLGNVNGQVEELYGGH
VIVKAFNGEEKSIEEFNKTNEKLYGSAWKSQFLSGMMQPIMMFIGNLGYVAVSIMGGWLVIKNTIEVGDIQSFIQYVRSF
TQPITQVAQVTNLLQSTAAAAERVFEFLEEDEEDQTVPNPVSVEGLDGRVDFNDVHFGYDENKTIINDFTAHVKPGQKIA
IVGPTGAGKTTMIKLLMRFYDVNSGEILIDGHNVKDFNRTELREMFGMVLQDTWLFNGTIMDNIRYGRLNATDEEVIEAA
KAAHVHHFVKTLPDGYKMELNEEGTNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVLIQKAMDNLMKGRTSFI
IAHRLSTIRDADLILVMNEGDIVEQGNHEELLAKGGFYAKLYNSQFERSEEAV
Nucleotide
Download Length: 1842 bp
>NTDB_id=576679 KQH81_RS07100 WP_027638011.1 1527915..1529756(+) (rcrQ) [Clostridium cadaveris strain IFB3C5]
ATGAGTAAAAAAGAATTTGGAGGACCTATGGGCAGAGGAATGAGAGGCCCAGGGGAAAAAGCAAAAGATTTTAAAGGAAC
TATGAAAAAACTTTTCAAATATATAAGTAGTTTTAAAATTGCTATTTTTGGAGTTATACTATTTGCTATAGGAAGCGCGG
CATTTTCAATAATAGGACCTAAAATTTTAGGTAAGGCAACTACTGAGATATTTAATGGTTTAGTTTCAAAAGTTTCGGGA
TCAGGAAATGGAATAGATTTCGATAAAATAGGAAAAATATTATTATTTCTATTAGGACTTTACATCATAAGTGCTATATT
CTCATTTATACAAGGAATAATAATGAGCGGTATTTCTCAAAAGATAGCTTATAATCTTAGAAGAGATTTATCTGAAAAGA
TAAATAGAATGCCTATGAAATATTTTGACACAAAAACTCACGGTGAAGTTTTATCAAGATTTACTAATGATATAGATACT
TTAGGACAGAGTTTAAATCAAAGTATGACACAGCTTATAACATCTATAACCATGATTATAGGAGTTCTTATAATGATGCT
TTCTATAAGTATTCCAATGACTTTAGTAGCGCTTTTAATGCTTCCTATATCTTTGGGGCTTATAATGACTATAGTTAAAA
AATCACAAAAATACTTTAAAGATCAACAGAAGTTCTTAGGAAATGTCAATGGTCAAGTAGAAGAACTATATGGAGGACAC
GTTATAGTAAAGGCCTTTAATGGTGAGGAGAAATCAATTGAAGAATTCAATAAAACTAATGAGAAATTATATGGTTCAGC
TTGGAAATCTCAATTTTTATCAGGAATGATGCAGCCTATAATGATGTTTATAGGGAATTTAGGATATGTTGCAGTTTCTA
TAATGGGTGGATGGCTTGTTATAAAAAACACCATAGAAGTTGGAGATATTCAATCTTTTATACAATATGTAAGAAGTTTT
ACTCAGCCTATAACTCAAGTTGCACAAGTAACTAACCTTTTACAATCTACAGCGGCGGCTGCAGAAAGAGTTTTTGAATT
TTTAGAAGAAGATGAAGAAGACCAAACAGTTCCAAATCCTGTATCAGTTGAAGGCTTGGATGGAAGAGTAGACTTTAATG
ATGTTCATTTTGGATATGATGAAAATAAAACTATAATAAATGACTTTACAGCTCATGTTAAACCAGGGCAAAAGATAGCA
ATAGTTGGACCAACAGGAGCAGGAAAGACCACAATGATTAAGCTTCTTATGAGATTTTACGATGTAAATAGCGGTGAGAT
ATTGATAGACGGCCATAATGTTAAGGACTTTAATAGAACAGAGCTTAGAGAGATGTTTGGAATGGTTCTTCAAGATACTT
GGTTATTTAATGGAACTATAATGGATAATATAAGATATGGAAGATTAAATGCTACTGATGAAGAAGTTATAGAGGCTGCA
AAGGCAGCACATGTTCATCATTTTGTAAAAACTCTTCCAGATGGATACAAGATGGAACTTAATGAAGAAGGGACAAATGT
ATCTCAAGGTCAAAAGCAGCTTTTAACTATTGCAAGAGCCATACTTGCTGATCCTAAAATATTAATACTTGATGAAGCTA
CAAGTTCTGTTGATACAAGAACAGAAGTTTTAATACAAAAGGCAATGGATAACTTAATGAAAGGCAGAACCAGTTTTATA
ATTGCTCACAGATTATCTACTATTAGAGACGCAGATTTAATTTTAGTTATGAACGAAGGAGATATAGTTGAGCAAGGTAA
TCATGAAGAATTATTGGCTAAAGGCGGTTTTTACGCTAAGTTATATAATTCACAGTTTGAAAGATCAGAAGAAGCAGTTT
AA
ATGAGTAAAAAAGAATTTGGAGGACCTATGGGCAGAGGAATGAGAGGCCCAGGGGAAAAAGCAAAAGATTTTAAAGGAAC
TATGAAAAAACTTTTCAAATATATAAGTAGTTTTAAAATTGCTATTTTTGGAGTTATACTATTTGCTATAGGAAGCGCGG
CATTTTCAATAATAGGACCTAAAATTTTAGGTAAGGCAACTACTGAGATATTTAATGGTTTAGTTTCAAAAGTTTCGGGA
TCAGGAAATGGAATAGATTTCGATAAAATAGGAAAAATATTATTATTTCTATTAGGACTTTACATCATAAGTGCTATATT
CTCATTTATACAAGGAATAATAATGAGCGGTATTTCTCAAAAGATAGCTTATAATCTTAGAAGAGATTTATCTGAAAAGA
TAAATAGAATGCCTATGAAATATTTTGACACAAAAACTCACGGTGAAGTTTTATCAAGATTTACTAATGATATAGATACT
TTAGGACAGAGTTTAAATCAAAGTATGACACAGCTTATAACATCTATAACCATGATTATAGGAGTTCTTATAATGATGCT
TTCTATAAGTATTCCAATGACTTTAGTAGCGCTTTTAATGCTTCCTATATCTTTGGGGCTTATAATGACTATAGTTAAAA
AATCACAAAAATACTTTAAAGATCAACAGAAGTTCTTAGGAAATGTCAATGGTCAAGTAGAAGAACTATATGGAGGACAC
GTTATAGTAAAGGCCTTTAATGGTGAGGAGAAATCAATTGAAGAATTCAATAAAACTAATGAGAAATTATATGGTTCAGC
TTGGAAATCTCAATTTTTATCAGGAATGATGCAGCCTATAATGATGTTTATAGGGAATTTAGGATATGTTGCAGTTTCTA
TAATGGGTGGATGGCTTGTTATAAAAAACACCATAGAAGTTGGAGATATTCAATCTTTTATACAATATGTAAGAAGTTTT
ACTCAGCCTATAACTCAAGTTGCACAAGTAACTAACCTTTTACAATCTACAGCGGCGGCTGCAGAAAGAGTTTTTGAATT
TTTAGAAGAAGATGAAGAAGACCAAACAGTTCCAAATCCTGTATCAGTTGAAGGCTTGGATGGAAGAGTAGACTTTAATG
ATGTTCATTTTGGATATGATGAAAATAAAACTATAATAAATGACTTTACAGCTCATGTTAAACCAGGGCAAAAGATAGCA
ATAGTTGGACCAACAGGAGCAGGAAAGACCACAATGATTAAGCTTCTTATGAGATTTTACGATGTAAATAGCGGTGAGAT
ATTGATAGACGGCCATAATGTTAAGGACTTTAATAGAACAGAGCTTAGAGAGATGTTTGGAATGGTTCTTCAAGATACTT
GGTTATTTAATGGAACTATAATGGATAATATAAGATATGGAAGATTAAATGCTACTGATGAAGAAGTTATAGAGGCTGCA
AAGGCAGCACATGTTCATCATTTTGTAAAAACTCTTCCAGATGGATACAAGATGGAACTTAATGAAGAAGGGACAAATGT
ATCTCAAGGTCAAAAGCAGCTTTTAACTATTGCAAGAGCCATACTTGCTGATCCTAAAATATTAATACTTGATGAAGCTA
CAAGTTCTGTTGATACAAGAACAGAAGTTTTAATACAAAAGGCAATGGATAACTTAATGAAAGGCAGAACCAGTTTTATA
ATTGCTCACAGATTATCTACTATTAGAGACGCAGATTTAATTTTAGTTATGAACGAAGGAGATATAGTTGAGCAAGGTAA
TCATGAAGAATTATTGGCTAAAGGCGGTTTTTACGCTAAGTTATATAATTCACAGTTTGAAAGATCAGAAGAAGCAGTTT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
51.115 |
95.106 |
0.486 |