Detailed information NTG0576243

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: JNUCC24_RS12280
• Genome accession: NZ_CP076532
• Coordinates: 2423035..2425419 (-)
• Length: 794 a.a.
• NCBI ID: WP_149126431.1
• Uniprot ID: -
• Organism: Bacillus sp. JNUCC-24
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2418035..2430419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC24_RS12245 (JNUCC24_12245)	-	2418999..2419727 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
JNUCC24_RS12250 (JNUCC24_12250)	-	2419741..2420550 (+)	810	WP_024423117.1	transporter substrate-binding domain-containing protein	-
JNUCC24_RS12255 (JNUCC24_12255)	-	2420628..2421281 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
JNUCC24_RS12260 (JNUCC24_12260)	-	2421297..2421947 (+)	651	WP_024423119.1	amino acid ABC transporter permease	-
JNUCC24_RS12265 (JNUCC24_12265)	-	2422049..2422180 (-)	132	WP_003216198.1	YrzQ family protein	-
JNUCC24_RS12270 (JNUCC24_12270)	-	2422201..2422392 (-)	192	WP_003216308.1	hypothetical protein	-
JNUCC24_RS12275 (JNUCC24_12275)	-	2422406..2422924 (-)	519	WP_056767970.1	hypothetical protein	-
JNUCC24_RS12280 (JNUCC24_12280)	recD2	2423035..2425419 (-)	2385	WP_149126431.1	ATP-dependent RecD-like DNA helicase	Machinery gene
JNUCC24_RS12285 (JNUCC24_12285)	-	2425439..2426092 (-)	654	WP_056767976.1	lipopolysaccharide assembly protein LapB	-
JNUCC24_RS12290 (JNUCC24_12290)	mnmA	2426152..2427270 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
JNUCC24_RS12295 (JNUCC24_12295)	-	2427365..2428507 (-)	1143	WP_044331688.1	cysteine desulfurase family protein	-
JNUCC24_RS12300 (JNUCC24_12300)	-	2428526..2428945 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
JNUCC24_RS12305 (JNUCC24_12305)	-	2429154..2430419 (+)	1266	WP_056767979.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.64 Da
• Isoelectric Point: 5.2653

>NTDB_id=576243 JNUCC24_RS12280 WP_149126431.1 2423035..2425419(-) (recD2) [Bacillus sp. JNUCC-24]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=576243 JNUCC24_RS12280 WP_149126431.1 2423035..2425419(-) (recD2) [Bacillus sp. JNUCC-24]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACTTTCTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGAAGCTTGGTAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTTGCCGCAGCGCTTCAGGAGCATCAAGGA
CTGGAACAAATCATGATCAGCTTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACACTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGAATCGGGTTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAAGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACCGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGCAAGCTTGTCA
TTATTGATGAATCAAGTATGCTGGATATTTGGCTTGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
AGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCAGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCTTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTACTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.774	100	0.8