Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   KPF73_RS06455 Genome accession   NZ_CP076507
Coordinates   1264390..1264905 (-) Length   171 a.a.
NCBI ID   WP_002903863.1    Uniprot ID   A0AB36G830
Organism   Campylobacter jejuni strain R16.0174     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1259390..1269905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPF73_RS06440 (KPF73_06440) - 1259494..1261311 (-) 1818 WP_052855591.1 motility associated factor glycosyltransferase family protein -
  KPF73_RS06445 (KPF73_06445) - 1261308..1263131 (-) 1824 WP_216170213.1 motility associated factor glycosyltransferase family protein -
  KPF73_RS06450 (KPF73_06450) - 1263141..1264390 (-) 1250 Protein_1264 DUF2920 family protein -
  KPF73_RS06455 (KPF73_06455) ctsG 1264390..1264905 (-) 516 WP_002903863.1 type II secretion system protein Machinery gene
  KPF73_RS06460 (KPF73_06460) tsaD 1264906..1265913 (-) 1008 WP_002889944.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  KPF73_RS06465 (KPF73_06465) - 1265910..1267304 (-) 1395 WP_002869556.1 M99 family carboxypeptidase catalytic domain-containing protein -
  KPF73_RS06470 (KPF73_06470) dxr 1267306..1268376 (-) 1071 WP_042635905.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  KPF73_RS06475 (KPF73_06475) cdsA 1268373..1269098 (-) 726 WP_002889945.1 phosphatidate cytidylyltransferase -
  KPF73_RS06480 (KPF73_06480) - 1269107..1269445 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18734.63 Da        Isoelectric Point: 7.2439

>NTDB_id=575910 KPF73_RS06455 WP_002903863.1 1264390..1264905(-) (ctsG) [Campylobacter jejuni strain R16.0174]
MKKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYFLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=575910 KPF73_RS06455 WP_002903863.1 1264390..1264905(-) (ctsG) [Campylobacter jejuni strain R16.0174]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATTTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93