Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   KPF74_RS06475 Genome accession   NZ_CP076505
Coordinates   1263492..1264007 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni strain R16.4752     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1258492..1269007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPF74_RS06460 (KPF74_06460) - 1258605..1260422 (-) 1818 WP_216175742.1 motility associated factor glycosyltransferase family protein -
  KPF74_RS06465 (KPF74_06465) - 1260419..1262242 (-) 1824 WP_216175743.1 motility associated factor glycosyltransferase family protein -
  KPF74_RS06470 (KPF74_06470) - 1262252..1263492 (-) 1241 Protein_1266 DUF2920 family protein -
  KPF74_RS06475 (KPF74_06475) ctsG 1263492..1264007 (-) 516 WP_002875272.1 type II secretion system protein Machinery gene
  KPF74_RS06480 (KPF74_06480) tsaD 1264008..1265015 (-) 1008 WP_071169875.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  KPF74_RS06485 (KPF74_06485) - 1265012..1266406 (-) 1395 WP_002909663.1 M99 family carboxypeptidase catalytic domain-containing protein -
  KPF74_RS06490 (KPF74_06490) dxr 1266408..1267478 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  KPF74_RS06495 (KPF74_06495) cdsA 1267475..1268200 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  KPF74_RS06500 (KPF74_06500) - 1268209..1268547 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=575883 KPF74_RS06475 WP_002875272.1 1263492..1264007(-) (ctsG) [Campylobacter jejuni strain R16.4752]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=575883 KPF74_RS06475 WP_002875272.1 1263492..1264007(-) (ctsG) [Campylobacter jejuni strain R16.4752]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936