Detailed information    

insolico Bioinformatically predicted

Overview

Name   proC   Type   Machinery gene
Locus tag   MPG07_RS01695 Genome accession   NZ_CP094116
Coordinates   332643..333416 (-) Length   257 a.a.
NCBI ID   WP_245046097.1    Uniprot ID   -
Organism   Helicobacter pylori strain Hpfe066     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 327643..338416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MPG07_RS01660 (MPG07_01660) - 327702..328862 (+) 1161 WP_245046064.1 HP1165 family MFS efflux transporter -
  MPG07_RS01665 (MPG07_01665) - 329040..330008 (-) 969 WP_245046066.1 NAD(P)/FAD-dependent oxidoreductase -
  MPG07_RS01670 (MPG07_01670) ccoS 330034..330225 (-) 192 WP_001090944.1 cbb3-type cytochrome oxidase assembly protein CcoS -
  MPG07_RS01675 (MPG07_01675) - 330348..330929 (+) 582 WP_154421823.1 DedA family protein -
  MPG07_RS01680 (MPG07_01680) - 331020..331514 (+) 495 WP_245046069.1 flavodoxin -
  MPG07_RS01685 (MPG07_01685) ybeY 331568..331996 (+) 429 WP_245046075.1 rRNA maturation RNase YbeY -
  MPG07_RS01690 (MPG07_01690) - 332083..332616 (-) 534 WP_245046086.1 Fic/DOC family protein -
  MPG07_RS01695 (MPG07_01695) proC 332643..333416 (-) 774 WP_245046097.1 pyrroline-5-carboxylate reductase Machinery gene
  MPG07_RS01700 (MPG07_01700) hopL 333430..337149 (-) 3720 WP_245046102.1 Hop family outer membrane protein HopL -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28347.98 Da        Isoelectric Point: 7.6640

>NTDB_id=575277 MPG07_RS01695 WP_245046097.1 332643..333416(-) (proC) [Helicobacter pylori strain Hpfe066]
MEILQFIGYGNMAQAILEGSHEILSKRFILEITGRNPEKIAPFLQEKNIQARIVPYKDAIDIHQKFVFLLFKPYNLKDFN
YQGQAKSVLSTLAGVGFEALSDAINSLHYLKCMPNIASKFALSSTAVCEKSPMPLISQKALNIIESFGNCVRVGNEEQVD
SSVATNGSTLAFLSLVASSLKDAGIREGLNARDSLELVEMSFKGFAKLLEKERPEMIIEQICTPKGATIEGLSVLEKKGV
RGAFIEACHESVKKMRL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=575277 MPG07_RS01695 WP_245046097.1 332643..333416(-) (proC) [Helicobacter pylori strain Hpfe066]
ATGGAAATCTTACAATTCATCGGCTATGGGAATATGGCTCAAGCGATTTTAGAAGGCTCTCATGAAATTTTATCCAAGCG
TTTTATTTTAGAGATTACCGGGCGAAACCCTGAAAAAATCGCCCCCTTTTTACAAGAAAAAAACATTCAAGCACGCATCG
TTCCCTATAAAGACGCTATTGATATACACCAAAAATTCGTGTTTTTACTTTTTAAGCCTTATAACCTTAAGGATTTTAAT
TATCAAGGGCAAGCCAAAAGCGTTTTGAGCACTTTAGCTGGCGTGGGTTTTGAAGCTTTAAGCGATGCGATAAATTCTTT
ACATTATCTCAAATGCATGCCCAATATTGCGAGCAAGTTCGCCCTTTCTTCTACGGCGGTGTGCGAAAAATCGCCCATGC
CCTTAATAAGCCAAAAGGCTTTGAATATTATTGAGAGTTTTGGGAATTGCGTGCGAGTGGGCAATGAAGAGCAGGTTGAT
TCTAGCGTAGCGACAAACGGGAGCACGCTTGCGTTTTTAAGCTTGGTAGCGAGCAGTTTGAAAGATGCCGGTATTAGAGA
GGGCTTGAACGCTAGAGATTCTTTAGAATTGGTGGAAATGAGTTTTAAAGGCTTTGCCAAGCTGTTAGAAAAAGAACGCC
CCGAGATGATTATAGAGCAAATTTGCACCCCTAAAGGCGCCACGATTGAAGGCTTGAGCGTTTTAGAAAAAAAGGGGGTT
AGGGGAGCGTTTATAGAAGCTTGCCATGAAAGCGTAAAAAAAATGCGCCTCTAA

Domains

Predicted by InterProScan.

NADP oxidoreductase coenzyme F420-dependent (F420_oxidored)

(4-94)

Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer)

(156-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

37.008

98.833

0.366