Detailed information NTG0057522

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: CTB89_RS08835
• Genome accession: NZ_AP017891
• Coordinates: 1770842..1772116 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102738.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain GN3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1765842..1777116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTB89_RS08805	mnmA	1766044..1767162 (-)	1119	WP_020977312.1	tRNA 2-thiouridine(34) synthase MnmA	-
CTB89_RS08810	-	1767163..1768305 (-)	1143	WP_000409169.1	cysteine desulfurase family protein	-
CTB89_RS08815	-	1768617..1769630 (+)	1014	WP_000985896.1	LLM class flavin-dependent oxidoreductase	-
CTB89_RS08820	-	1769867..1770013 (-)	147	WP_000009238.1	SAS049 family protein	-
CTB89_RS08825	-	1770053..1770235 (-)	183	WP_000752909.1	CsbD family protein	-
CTB89_RS08830	-	1770335..1770757 (-)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
CTB89_RS08835	rarA	1770842..1772116 (+)	1275	WP_000102738.1	replication-associated recombination protein A	Machinery gene
CTB89_RS08840	-	1772277..1773050 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
CTB89_RS08845	-	1773050..1773178 (-)	129	WP_014937034.1	hypothetical protein	-
CTB89_RS08855	aspS	1773511..1775277 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
CTB89_RS08860	hisS	1775293..1776555 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47234.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=57522 CTB89_RS08835 WP_000102738.1 1770842..1772116(+) (rarA) [Staphylococcus aureus strain GN3]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMAYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=57522 CTB89_RS08835 WP_000102738.1 1770842..1772116(+) (rarA) [Staphylococcus aureus strain GN3]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAGGATGAAGAGAATGGTTTAAAAACATATCAACCCAAAATTGATGAAGATGCCATGGCCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGATTGTTTACAAAAAGGTGCATTTGTAAGTGATAAAGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTACGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGGATACCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686