Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | JNO61_RS18795 | Genome accession | NZ_CP076184 |
| Coordinates | 3618166..3618945 (-) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain A49 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3583844..3657768 | 3618166..3618945 | within | 0 |
Gene organization within MGE regions
Location: 3583844..3657768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNO61_RS18645 (JNO61_18645) | - | 3584188..3585858 (-) | 1671 | WP_000823085.1 | ribonuclease J | - |
| JNO61_RS18650 (JNO61_18650) | dapA | 3586624..3587502 (-) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| JNO61_RS18655 (JNO61_18655) | dapG | 3587514..3588746 (-) | 1233 | WP_000692470.1 | aspartate kinase | - |
| JNO61_RS18660 (JNO61_18660) | asd | 3588770..3589816 (-) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| JNO61_RS18665 (JNO61_18665) | dpaB | 3589967..3590566 (-) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| JNO61_RS18670 (JNO61_18670) | dpaA | 3590563..3591465 (-) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| JNO61_RS18675 (JNO61_18675) | - | 3591740..3591991 (-) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| JNO61_RS18680 (JNO61_18680) | - | 3592118..3593359 (-) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| JNO61_RS18685 (JNO61_18685) | - | 3593446..3594345 (-) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| JNO61_RS18690 (JNO61_18690) | pnp | 3594497..3596635 (-) | 2139 | WP_000076750.1 | polyribonucleotide nucleotidyltransferase | - |
| JNO61_RS18695 (JNO61_18695) | rpsO | 3596796..3597065 (-) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| JNO61_RS18700 (JNO61_18700) | ribF | 3597166..3598137 (-) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| JNO61_RS18705 (JNO61_18705) | truB | 3598181..3599104 (-) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| JNO61_RS18710 (JNO61_18710) | rbfA | 3599191..3599547 (-) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| JNO61_RS18715 (JNO61_18715) | - | 3599563..3599844 (-) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| JNO61_RS18720 (JNO61_18720) | infB | 3599841..3601901 (-) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| JNO61_RS18725 (JNO61_18725) | - | 3601906..3602217 (-) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| JNO61_RS18730 (JNO61_18730) | rnpM | 3602218..3602490 (-) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| JNO61_RS18735 (JNO61_18735) | nusA | 3602502..3603608 (-) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| JNO61_RS18740 (JNO61_18740) | rimP | 3603626..3604096 (-) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| JNO61_RS18745 (JNO61_18745) | - | 3604429..3608730 (-) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| JNO61_RS18750 (JNO61_18750) | - | 3608855..3610555 (-) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| JNO61_RS18755 (JNO61_18755) | rseP | 3610665..3611921 (-) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| JNO61_RS18760 (JNO61_18760) | dxr | 3611938..3613080 (-) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| JNO61_RS18765 (JNO61_18765) | cdsA | 3613104..3613895 (-) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| JNO61_RS18770 (JNO61_18770) | uppS | 3613913..3614689 (-) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| JNO61_RS18775 (JNO61_18775) | frr | 3614775..3615332 (-) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| JNO61_RS18780 (JNO61_18780) | pyrH | 3615335..3616057 (-) | 723 | WP_000042663.1 | UMP kinase | - |
| JNO61_RS18785 (JNO61_18785) | tsf | 3616124..3617011 (-) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| JNO61_RS18790 (JNO61_18790) | rpsB | 3617115..3617816 (-) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| JNO61_RS18795 (JNO61_18795) | codY | 3618166..3618945 (-) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| JNO61_RS18800 (JNO61_18800) | hslU | 3619023..3620414 (-) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| JNO61_RS18805 (JNO61_18805) | hslV | 3620437..3620979 (-) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| JNO61_RS18810 (JNO61_18810) | xerC | 3621022..3621921 (-) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| JNO61_RS18815 (JNO61_18815) | trmFO | 3621987..3623291 (-) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| JNO61_RS18820 (JNO61_18820) | topA | 3623342..3625420 (-) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| JNO61_RS18825 (JNO61_18825) | dprA | 3625565..3626313 (-) | 749 | Protein_3683 | DNA-processing protein DprA | - |
| JNO61_RS18830 (JNO61_18830) | sucD | 3626521..3627423 (-) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| JNO61_RS18835 (JNO61_18835) | sucC | 3627444..3628604 (-) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| JNO61_RS18840 (JNO61_18840) | rnhB | 3628798..3629571 (-) | 774 | WP_017651024.1 | ribonuclease HII | - |
| JNO61_RS18845 (JNO61_18845) | ylqF | 3629623..3630513 (-) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| JNO61_RS18850 (JNO61_18850) | lepB | 3630534..3631085 (-) | 552 | WP_000711857.1 | signal peptidase I | - |
| JNO61_RS18855 (JNO61_18855) | rplS | 3631187..3631531 (-) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| JNO61_RS18860 (JNO61_18860) | trmD | 3631678..3632412 (-) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| JNO61_RS18865 (JNO61_18865) | rimM | 3632412..3632927 (-) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| JNO61_RS18870 (JNO61_18870) | - | 3633048..3633275 (-) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| JNO61_RS18875 (JNO61_18875) | rpsP | 3633290..3633562 (-) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| JNO61_RS18880 (JNO61_18880) | ffh | 3633663..3635012 (-) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| JNO61_RS18885 (JNO61_18885) | - | 3635025..3635357 (-) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| JNO61_RS18890 (JNO61_18890) | ftsY | 3635491..3636480 (-) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| JNO61_RS18895 (JNO61_18895) | smc | 3636496..3640065 (-) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| JNO61_RS18900 (JNO61_18900) | rncS | 3640212..3640949 (-) | 738 | WP_017651025.1 | ribonuclease III | - |
| JNO61_RS18905 (JNO61_18905) | acpP | 3641008..3641241 (-) | 234 | WP_000786062.1 | acyl carrier protein | - |
| JNO61_RS18910 (JNO61_18910) | fabG | 3641311..3642051 (-) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| JNO61_RS18915 (JNO61_18915) | fabD | 3642051..3642995 (-) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| JNO61_RS18920 (JNO61_18920) | plsX | 3643010..3644002 (-) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| JNO61_RS18925 (JNO61_18925) | fapR | 3643999..3644592 (-) | 594 | WP_000747352.1 | transcription factor FapR | - |
| JNO61_RS18930 (JNO61_18930) | recG | 3644681..3646729 (-) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| JNO61_RS18935 (JNO61_18935) | - | 3647019..3648695 (-) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| JNO61_RS18940 (JNO61_18940) | - | 3648718..3649080 (-) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| JNO61_RS18945 (JNO61_18945) | rpmB | 3649459..3649647 (+) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| JNO61_RS18950 (JNO61_18950) | spoVM | 3649720..3649800 (-) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| JNO61_RS18955 (JNO61_18955) | - | 3649867..3650547 (-) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| JNO61_RS18960 (JNO61_18960) | rpe | 3650647..3651291 (-) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| JNO61_RS18965 (JNO61_18965) | rsgA | 3651294..3652175 (-) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| JNO61_RS18970 (JNO61_18970) | prkC | 3652444..3654417 (-) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| JNO61_RS18975 (JNO61_18975) | - | 3654426..3655178 (-) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| JNO61_RS18980 (JNO61_18980) | rlmN | 3655183..3656271 (-) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| JNO61_RS18985 (JNO61_18985) | rsmB | 3656276..3657610 (-) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=573152 JNO61_RS18795 WP_000421288.1 3618166..3618945(-) (codY) [Bacillus anthracis strain A49]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=573152 JNO61_RS18795 WP_000421288.1 3618166..3618945(-) (codY) [Bacillus anthracis strain A49]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |