Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | JMUB1235_RS00610 | Genome accession | NZ_AP017629 |
| Coordinates | 98493..98777 (+) | Length | 94 a.a. |
| NCBI ID | WP_011284422.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain JMUB1235 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 93493..103777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMUB1235_RS00585 (JMUB1235_0118) | - | 95439..95804 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| JMUB1235_RS00590 (JMUB1235_0119) | comGA | 95897..96835 (+) | 939 | WP_020904831.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JMUB1235_RS00595 (JMUB1235_0120) | comGB | 96771..97805 (+) | 1035 | WP_226316548.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JMUB1235_RS00600 (JMUB1235_0121) | comGC | 97807..98133 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JMUB1235_RS00605 (JMUB1235_0122) | comGD | 98108..98536 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| JMUB1235_RS00610 (JMUB1235_0123) | comGE | 98493..98777 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| JMUB1235_RS00615 (JMUB1235_0124) | comGF | 98770..99204 (+) | 435 | WP_020904833.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JMUB1235_RS00620 (JMUB1235_0125) | comGG | 99188..99514 (+) | 327 | WP_002986539.1 | competence type IV pilus minor pilin ComGG | - |
| JMUB1235_RS00625 (JMUB1235_0126) | comGH | 99612..100565 (+) | 954 | WP_010921802.1 | class I SAM-dependent methyltransferase | Machinery gene |
| JMUB1235_RS00630 (JMUB1235_0127) | - | 100624..101820 (+) | 1197 | WP_020904834.1 | acetate kinase | - |
| JMUB1235_RS00635 | - | 102007..102315 (+) | 309 | Protein_90 | hypothetical protein | - |
| JMUB1235_RS00640 (JMUB1235_0128) | proC | 102398..103168 (-) | 771 | WP_002986527.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10654.59 Da Isoelectric Point: 8.9043
>NTDB_id=57299 JMUB1235_RS00610 WP_011284422.1 98493..98777(+) (comGE) [Streptococcus pyogenes strain JMUB1235]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEITLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=57299 JMUB1235_RS00610 WP_011284422.1 98493..98777(+) (comGE) [Streptococcus pyogenes strain JMUB1235]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATTGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATAACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |