Detailed information NTG0570941

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MNG38_RS14135
• Genome accession: NZ_CP093289
• Coordinates: 2708701..2709966 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain H2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2703701..2714966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MNG38_RS14115 (MNG38_14115)	yrrB	2705072..2705692 (-)	621	WP_015251572.1	tetratricopeptide repeat protein	-
MNG38_RS14120 (MNG38_14120)	mnmA	2705778..2706893 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
MNG38_RS14125 (MNG38_14125)	iscSA	2706921..2708063 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
MNG38_RS14130 (MNG38_14130)	cymR	2708082..2708498 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MNG38_RS14135 (MNG38_14135)	rarA	2708701..2709966 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
MNG38_RS14140 (MNG38_14140)	tcdA	2710008..2710772 (-)	765	WP_003229763.1	ThiF family adenylyltransferase	-
MNG38_RS14150 (MNG38_14150)	aspS	2711108..2712886 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
MNG38_RS14155 (MNG38_14155)	hisS	2712900..2714174 (-)	1275	WP_015251569.1	histidine--tRNA ligase	-
MNG38_RS14160 (MNG38_14160)	yrzK	2714556..2714726 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=570941 MNG38_RS14135 WP_004398500.1 2708701..2709966(+) (rarA) [Bacillus subtilis strain H2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=570941 MNG38_RS14135 WP_004398500.1 2708701..2709966(+) (rarA) [Bacillus subtilis strain H2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCACGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1