Detailed information NTG0570437

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MM522_RS11480
• Genome accession: NZ_CP093067
• Coordinates: 2211003..2212268 (+)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ATC-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2206003..2217268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MM522_RS11460 (MM522_11460)	yrrB	2207374..2207994 (-)	621	WP_235701204.1	tetratricopeptide repeat protein	-
MM522_RS11465 (MM522_11465)	mnmA	2208080..2209195 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
MM522_RS11470 (MM522_11470)	iscSA	2209223..2210365 (-)	1143	WP_014477512.1	cysteine desulfurase family protein	-
MM522_RS11475 (MM522_11475)	cymR	2210384..2210800 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MM522_RS11480 (MM522_11480)	rarA	2211003..2212268 (+)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
MM522_RS11485 (MM522_11485)	tcdA	2212308..2213072 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
MM522_RS11495 (MM522_11495)	aspS	2213407..2215185 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
MM522_RS11500 (MM522_11500)	hisS	2215199..2216473 (-)	1275	WP_101172353.1	histidine--tRNA ligase	-
MM522_RS11505 (MM522_11505)	yrzK	2216855..2217025 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=570437 MM522_RS11480 WP_019712521.1 2211003..2212268(+) (rarA) [Bacillus subtilis strain ATC-3]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=570437 MM522_RS11480 WP_019712521.1 2211003..2212268(+) (rarA) [Bacillus subtilis strain ATC-3]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCTAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAATGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCAAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993