Detailed information NTG0000570

Bioinformatically predicted

Overview

• Name: comS
• Type: Regulator
• Locus tag: -
• Genome accession: NC_012004
• Coordinates: 63049..63144 (+)
• Length: 32 a.a.
• NCBI ID: -
• Uniprot ID: -
• Organism: Streptococcus uberis 0140J
• Function: activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 58049..68144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SUB_RS00350 (SUB0054)	purE	58762..59250 (+)	489	WP_012657620.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
SUB_RS00355 (SUB0055)	purK	59237..60310 (+)	1074	WP_012657621.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
SUB_RS00360 (SUB0056)	purB	60624..61916 (+)	1293	WP_012657622.1	adenylosuccinate lyase	-
SUB_RS00365 (SUB0057)	-	62035..62949 (+)	915	WP_269441089.1	helix-turn-helix domain-containing protein	-
SUB_RS09690	comS	63049..63144 (+)	96	WP_198433762.1	quorum-sensing system DWW-type pheromone	Regulator
SUB_RS00370 (SUB0059)	ruvB	63179..64183 (+)	1005	WP_012657625.1	Holliday junction branch migration DNA helicase RuvB	-
SUB_RS00375 (SUB0060)	-	64434..64862 (+)	429	WP_012657626.1	low molecular weight protein-tyrosine-phosphatase	-
SUB_RS00380 (SUB0061)	-	64867..65280 (+)	414	WP_012657627.1	membrane protein	-
SUB_RS00385 (SUB0062)	-	65277..67055 (+)	1779	WP_012657628.1	acyltransferase family protein	-

Sequence

Protein

• Length: 32 a.a.
• Molecular weight: 3877.60 Da
• Isoelectric Point: 8.7337

>NTDB_id=570 63049..63144(+) (comS) [Streptococcus uberis 0140J]
MFKKIHFYVTTFSFLAVALITFLSEKDWWHIG

Nucleotide

• Length: 96 bp

>NTDB_id=570 63049..63144(+) (comS) [Streptococcus uberis 0140J]
ATGTTTAAAAAAATTCATTTTTATGTAACTACTTTTTCTTTTCTAGCTGTTGCACTGATTACTTTTCTATCTGAAAAAGA
TTGGTGGCATATCGGA

XIP

This gene is known to encode the precursor of σ^X inducing peptide (XIP), which involves in competence development. The mature XIP sequence is displayed as below:

KDWWHIG

Domains

No domain identified.