Detailed information NTG0056981

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ATE38_RS05610
• Genome accession: NZ_AP017377
• Coordinates: 1114520..1115794 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain OC8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1109520..1120794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATE38_RS05585	hisS	1110081..1111343 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
ATE38_RS05590	aspS	1111359..1113125 (+)	1767	WP_024937116.1	aspartate--tRNA ligase	-
ATE38_RS05600	-	1113458..1113586 (+)	129	WP_001790559.1	hypothetical protein	-
ATE38_RS05605	-	1113586..1114359 (+)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
ATE38_RS05610	rarA	1114520..1115794 (-)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
ATE38_RS05615	-	1115879..1116301 (+)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
ATE38_RS05620	-	1116401..1116583 (+)	183	WP_000752913.1	CsbD family protein	-
ATE38_RS05625	-	1116623..1116769 (+)	147	WP_000009238.1	SAS049 family protein	-
ATE38_RS05630	-	1117006..1118019 (-)	1014	WP_024937115.1	LLM class flavin-dependent oxidoreductase	-
ATE38_RS05635	-	1118331..1119473 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
ATE38_RS05640	mnmA	1119474..1120592 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=56981 ATE38_RS05610 WP_000102735.1 1114520..1115794(-) (rarA) [Staphylococcus aureus strain OC8]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=56981 ATE38_RS05610 WP_000102735.1 1114520..1115794(-) (rarA) [Staphylococcus aureus strain OC8]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGACAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684