Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   KIV12_RS06910 Genome accession   NZ_CP075052
Coordinates   1411463..1413754 (+) Length   763 a.a.
NCBI ID   WP_135009734.1    Uniprot ID   -
Organism   Bacillus altitudinis strain LZP 02     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1406463..1418754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIV12_RS06885 (KIV12_06885) - 1407961..1409187 (+) 1227 WP_035701209.1 EAL and HDOD domain-containing protein -
  KIV12_RS06890 (KIV12_06890) - 1409224..1409577 (-) 354 WP_017367963.1 hypothetical protein -
  KIV12_RS06895 (KIV12_06895) degQ 1410083..1410223 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  KIV12_RS06900 (KIV12_06900) - 1410375..1411298 (+) 924 WP_217967871.1 polyprenyl synthetase family protein -
  KIV12_RS06905 (KIV12_06905) comX 1411276..1411449 (+) 174 WP_135009732.1 competence pheromone ComX -
  KIV12_RS06910 (KIV12_06910) comP 1411463..1413754 (+) 2292 WP_135009734.1 ATP-binding protein Regulator
  KIV12_RS06915 (KIV12_06915) comA 1413835..1414476 (+) 642 WP_007500477.1 response regulator transcription factor Regulator
  KIV12_RS06920 (KIV12_06920) - 1414500..1414889 (+) 390 WP_017358943.1 hotdog fold thioesterase -
  KIV12_RS06925 (KIV12_06925) mnhG 1414980..1415354 (-) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  KIV12_RS06930 (KIV12_06930) - 1415338..1415619 (-) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  KIV12_RS06935 (KIV12_06935) - 1415619..1416098 (-) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  KIV12_RS06940 (KIV12_06940) - 1416105..1417583 (-) 1479 WP_217967872.1 Na+/H+ antiporter subunit D -
  KIV12_RS06945 (KIV12_06945) - 1417576..1417917 (-) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  KIV12_RS06950 (KIV12_06950) - 1417917..1418348 (-) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88301.69 Da        Isoelectric Point: 7.7148

>NTDB_id=567396 KIV12_RS06910 WP_135009734.1 1411463..1413754(+) (comP) [Bacillus altitudinis strain LZP 02]
MQKFYSKLTVILMILSFIYVIYISYINVFNIFVGAVVSVNDNDQLEIVDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIVIKNVRLLSQENLFIYLIPVIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISGFIVITTMTCVPPLYMHFMYQYLKELGTKIISVRVLLSLYAVPFINLVLEIYFKNMVLAAFNLLSFFI
LAFITIIITFRSAKRWKGTEIGNVLSAFGLVLITSFSPFMLFFIIPYFFHKYFISPYILASFALLIPFFLVYQFMSNKLY
NVDFFMGRIKYYSLLAITPTIVVVIIFDFIQKPSANFYTLKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIRDASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIEEIDEQTEDSNLWKKYVDQFHDLLGEVGKIIELNKGF
MIKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGVGFDAS
QLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=567396 KIV12_RS06910 WP_135009734.1 1411463..1413754(+) (comP) [Bacillus altitudinis strain LZP 02]
ATGCAAAAATTTTACTCAAAACTAACTGTTATTTTAATGATCCTTAGCTTCATTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATTTTTGTAGGAGCAGTCGTTTCGGTAAATGACAACGATCAACTTGAAATAGTAGATGTTGTAGATTTTA
CAGACAGCTATTATGCTGGTGTTAGAAAAGGCGATATTATACTTGAAGTGAATGGCAACAAAGAACCTACGGAAGAAGTA
AGAAGGGGCTATTTAGCAAATGTCAAAAGTTTAGTTGTGGATAGACATGGCGATGAAATTGTCATAAAAAATGTAAGGTT
ATTAAGTCAAGAAAATCTGTTTATTTATTTGATACCTGTCATTTTTTATTCAATCTGCCTATTTTGTATATTTATGATTT
TAAAAATCAATAAATCTAGGAAAAAAGAGTCTGCATATATCCTTGCCCTTTTTTTATTGGCTGTTGCTGTAGCATATGTC
AGTTCTGGTGGATCTGGTAAAGGTGAGTATATTAGTGGTTTTATCGTCATTACTACGATGACTTGTGTACCTCCTTTATA
TATGCACTTTATGTATCAGTATTTGAAGGAATTGGGTACGAAAATTATTAGCGTACGTGTGCTTCTTTCTTTGTATGCAG
TTCCATTTATAAATCTTGTTTTAGAAATTTATTTTAAAAATATGGTTTTAGCTGCTTTCAACTTACTTTCGTTTTTTATA
CTTGCATTTATAACGATTATTATCACATTCAGATCAGCTAAAAGGTGGAAAGGTACGGAAATTGGTAATGTCCTTAGTGC
ATTTGGACTTGTCTTAATCACGTCATTCAGTCCTTTTATGCTGTTCTTTATCATTCCATATTTTTTTCATAAGTATTTTA
TTTCGCCTTATATTCTTGCTTCGTTTGCATTATTAATTCCGTTTTTCTTAGTCTATCAATTTATGTCAAACAAATTATAT
AATGTTGATTTCTTTATGGGAAGAATTAAATATTACAGCCTTTTAGCGATCACACCTACGATAGTAGTGGTGATTATATT
TGATTTCATTCAGAAGCCAAGTGCTAATTTTTATACATTGAAATTTACAATTATCACATACATTCTTATGCTCACCGTCT
TTTATTTTAAAGAAATCATCGATTTTCGTTTTCGTCTAAAGCGTTTCTCAGAGAAACATAATTATCAGGATAGTGTGTTT
AAATTCACCCAGCTCATTCGTGATGCTTCATCACTTCATCAAGTGTTATATCATTTGAAATACACCATTTTAGAAGTGCT
TGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAGGCTGATGGACAAATTGAAGAAATTGATGAGCAGACAGAAGACAGCA
ACCTATGGAAAAAGTATGTCGATCAATTTCACGATTTATTAGGCGAAGTAGGGAAAATTATCGAGCTTAATAAAGGGTTT
ATGATAAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGACACCTAAGCTAACCCG
CGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCAAGATCGAAGAACTGA
TGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTCGCCATGGAAGAGAAG
CAGCGCTCAGATTTAGCAAGGGATCTTCATGATTCTGTGCTACAGGATTTGATTTCACTGAAGAGACAGTCCGAGATGTT
CTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATGAACAAATGTCTAAGG
TGATTCAAACTACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTGGGGTTAGTGAAGGCAATTTCG
AAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGATAAAGAATTGGACAT
TGATATTGACTCACAGCTGAATATTTACCGGATAGTGCAGGAGCTGCTATCCAATGCGTTGAAGCATTCTAAGGCCAGCC
AAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTCGGATTTGATGCAAGC
CAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAATGGAAAGCTTCAAAT
TCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.843

100

0.498