Detailed information NTG0567387

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MKS87_RS14820
• Genome accession: NZ_CP092631
• Coordinates: 2814108..2815373 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain YB-15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2809108..2820373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKS87_RS14800 (MKS87_14800)	yrrB	2810479..2811099 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
MKS87_RS14805 (MKS87_14805)	mnmA	2811185..2812300 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
MKS87_RS14810 (MKS87_14810)	iscSA	2812331..2813470 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
MKS87_RS14815 (MKS87_14815)	cymR	2813489..2813905 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MKS87_RS14820 (MKS87_14820)	rarA	2814108..2815373 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
MKS87_RS14825 (MKS87_14825)	tcdA	2815415..2816179 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
MKS87_RS14835 (MKS87_14835)	aspS	2816515..2818293 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
MKS87_RS14840 (MKS87_14840)	hisS	2818307..2819581 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
MKS87_RS14845 (MKS87_14845)	yrzK	2819963..2820133 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=567387 MKS87_RS14820 WP_004398500.1 2814108..2815373(+) (rarA) [Bacillus subtilis strain YB-15]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=567387 MKS87_RS14820 WP_004398500.1 2814108..2815373(+) (rarA) [Bacillus subtilis strain YB-15]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1