Detailed information NTG0565370

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MKD48_RS05925
• Genome accession: NZ_CP092475
• Coordinates: 1133347..1134621 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain P5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1128347..1139621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKD48_RS05900	hisS	1128908..1130170 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
MKD48_RS05905	aspS	1130186..1131952 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
MKD48_RS05915	-	1132285..1132413 (+)	129	WP_001808039.1	hypothetical protein	-
MKD48_RS05920	-	1132413..1133186 (+)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
MKD48_RS05925	rarA	1133347..1134621 (-)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
MKD48_RS05930	-	1134706..1135128 (+)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
MKD48_RS05935	-	1135228..1135410 (+)	183	WP_000752909.1	CsbD family protein	-
MKD48_RS05940	-	1135450..1135596 (+)	147	WP_000009238.1	SAS049 family protein	-
MKD48_RS05945	-	1135833..1136846 (-)	1014	WP_000985901.1	LLM class flavin-dependent oxidoreductase	-
MKD48_RS05950	-	1137158..1138300 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
MKD48_RS05955	mnmA	1138301..1139419 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=565370 MKD48_RS05925 WP_000102735.1 1133347..1134621(-) (rarA) [Staphylococcus aureus strain P5]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=565370 MKD48_RS05925 WP_000102735.1 1133347..1134621(-) (rarA) [Staphylococcus aureus strain P5]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTTAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684