Detailed information NTG0565046

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: MID01_RS14565
• Genome accession: NZ_CP092369
• Coordinates: 2770605..2771870 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZW
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2765605..2776870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MID01_RS14545 (MID01_14545)	yrrB	2766976..2767596 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
MID01_RS14550 (MID01_14550)	mnmA	2767682..2768797 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
MID01_RS14555 (MID01_14555)	iscSA	2768828..2769967 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
MID01_RS14560 (MID01_14560)	cymR	2769986..2770402 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MID01_RS14565 (MID01_14565)	rarA	2770605..2771870 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
MID01_RS14570 (MID01_14570)	tcdA	2771910..2772674 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
MID01_RS14580 (MID01_14580)	aspS	2773009..2774787 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
MID01_RS14585 (MID01_14585)	hisS	2774801..2776075 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
MID01_RS14590 (MID01_14590)	yrzK	2776457..2776627 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=565046 MID01_RS14565 WP_014480427.1 2770605..2771870(+) (rarA) [Bacillus subtilis strain ZW]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=565046 MID01_RS14565 WP_014480427.1 2770605..2771870(+) (rarA) [Bacillus subtilis strain ZW]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993