Detailed information NTG0563575

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: L2I08_RS18555
• Genome accession: NZ_CP091820
• Coordinates: 4342017..4343381 (-)
• Length: 454 a.a.
• NCBI ID: WP_010636558.1
• Uniprot ID: A0ABY3GVE4
• Organism: Streptomyces sp. NBU3104
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4337017..4348381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2I08_RS18535 (L2I08_18535)	alaS	4337293..4339965 (-)	2673	WP_003947043.1	alanine--tRNA ligase	-
L2I08_RS18540 (L2I08_18540)	-	4339965..4340327 (-)	363	WP_237896411.1	hypothetical protein	-
L2I08_RS18545 (L2I08_18545)	-	4340334..4340786 (-)	453	WP_026047935.1	DUF948 domain-containing protein	-
L2I08_RS18550 (L2I08_18550)	rpsD	4341034..4341648 (-)	615	WP_003947046.1	30S ribosomal protein S4	-
L2I08_RS18555 (L2I08_18555)	rarA	4342017..4343381 (-)	1365	WP_010636558.1	replication-associated recombination protein A	Machinery gene
L2I08_RS18560 (L2I08_18560)	-	4343449..4344093 (-)	645	WP_010636559.1	vitamin K epoxide reductase family protein	-
L2I08_RS18565 (L2I08_18565)	hisS	4344376..4345638 (-)	1263	WP_003947049.1	histidine--tRNA ligase	-
L2I08_RS18570 (L2I08_18570)	-	4345654..4346373 (-)	720	WP_026282514.1	MBL fold metallo-hydrolase	-
L2I08_RS18575 (L2I08_18575)	-	4346538..4347368 (+)	831	WP_003947051.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 47933.23 Da
• Isoelectric Point: 6.2449

>NTDB_id=563575 L2I08_RS18555 WP_010636558.1 4342017..4343381(-) (rarA) [Streptomyces sp. NBU3104]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGGGPAGPSSVFLWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLRGLVHRALTDERGLAGSVTLAEDAEAHLLRVAGGDARRALTALEAGAGAALDKGEAE
ISLTTLEESVDRAAVAYDRAGDQHYDVASALIKSIRGSDVDAALHYLARMIDAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPTHLRDGHYKGAAKLGHAQGYIY
PHDVPGAIAAQQYAPDALAGKRYYQPTRYGAEARYADVVEKVRERLAEGGRGEG

Nucleotide

• Length: 1365 bp

>NTDB_id=563575 L2I08_RS18555 WP_010636558.1 4342017..4343381(-) (rarA) [Streptomyces sp. NBU3104]
GTGGAACCCGACCTCTTCACCGCAGCAGCCGAGGACCGCCAGGAGAAGGACCCGTCCAGCAGCCCCCTGGCCGTCCGGAT
GCGCCCCCGCACCCTGGACGAGGTGGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGCCTCGTCGGCG
AGGGCGGCGGCGGCCCGGCCGGCCCCTCCTCCGTCTTCCTCTGGGGCCCGCCCGGCATCGGCAAGACGACCCTCGCGTAC
GTGGTCAGCAAGGCGACCAACAAGCGGTTCGTGGAGCTCTCCGCGATCACCGCCGGGGTCAAGGAGGTGCGCGCCGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCCCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCCTCATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTGGAGCCGCTGACCGACGAGGACCTGCGCGGCCTCGT
CCACCGCGCCCTCACCGACGAGCGGGGCCTGGCCGGCTCCGTCACCCTCGCCGAGGACGCCGAGGCCCACCTGCTGCGGG
TCGCCGGGGGTGACGCCCGCCGGGCCCTGACCGCCCTGGAGGCGGGCGCCGGGGCCGCGCTCGACAAGGGCGAGGCGGAG
ATCAGCCTCACCACCCTCGAGGAGTCGGTGGACCGGGCCGCCGTCGCCTACGACCGCGCCGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGACGCGG
GGGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCGGCCAGCGAGGACATCGGCCTCGCCGACCCCACCGCCCTG
CCCACCGCGGTCGCCGCCGCCCAGGCCGTGGCCATGATCGGCTTCCCCGAGGCCGCGCTGACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTGGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGCCACG
CCGGACCGGTCCCCACCCACCTGCGGGACGGCCACTACAAGGGCGCGGCCAAGCTCGGCCACGCCCAGGGGTACATCTAC
CCGCACGACGTCCCCGGTGCCATCGCCGCCCAGCAGTACGCTCCGGACGCCCTCGCCGGGAAGCGGTACTACCAGCCCAC
CCGGTACGGCGCGGAGGCCCGCTACGCCGACGTGGTCGAGAAGGTCCGCGAGCGCCTCGCCGAGGGCGGCCGCGGCGAGG
GCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.186	94.714	0.419