Detailed information NTG0559521

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: KEM15_RS07505
• Genome accession: NZ_CP073632
• Coordinates: 1449664..1450599 (-)
• Length: 311 a.a.
• NCBI ID: WP_274504176.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain NN1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1444664..1455599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEM15_RS07475 (KEM15_07360)	-	1444938..1446578 (-)	1641	WP_274504174.1	polysaccharide biosynthesis protein	-
KEM15_RS07480 (KEM15_07365)	yghU	1446738..1447526 (-)	789	WP_130555256.1	glutathione-dependent disulfide-bond oxidoreductase	-
KEM15_RS07485 (KEM15_07370)	-	1447535..1447825 (-)	291	WP_217374083.1	hypothetical protein	-
KEM15_RS07490 (KEM15_07375)	rplA	1447931..1448620 (-)	690	WP_217374084.1	50S ribosomal protein L1	-
KEM15_RS07495 (KEM15_07380)	rplK	1448661..1449086 (-)	426	WP_024382554.1	50S ribosomal protein L11	-
KEM15_RS07500 (KEM15_07385)	-	1449241..1449609 (+)	369	WP_274504175.1	DUF3397 domain-containing protein	-
KEM15_RS07505 (KEM15_07390)	amiF	1449664..1450599 (-)	936	WP_274504176.1	ATP-binding cassette domain-containing protein	Regulator
KEM15_RS07510 (KEM15_07395)	oppD	1450596..1451639 (-)	1044	WP_274504177.1	ABC transporter ATP-binding protein	Regulator
KEM15_RS07515 (KEM15_07400)	-	1451654..1452685 (-)	1032	WP_274504178.1	ABC transporter permease	-
KEM15_RS07520 (KEM15_07405)	-	1452696..1453610 (-)	915	WP_274504179.1	ABC transporter permease	-
KEM15_RS07525 (KEM15_07410)	-	1453681..1454937 (-)	1257	Protein_1451	peptide ABC transporter substrate-binding protein	-
KEM15_RS07530 (KEM15_07415)	-	1455094..1455480 (-)	387	WP_217374089.1	VOC family protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34983.74 Da
• Isoelectric Point: 6.0122

>NTDB_id=559521 KEM15_RS07505 WP_274504176.1 1449664..1450599(-) (amiF) [Streptococcus parasuis strain NN1]
MSESRKKLVELKNVSLTFNAGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRTILKLYDYNAGDILFDGQSISKL
SGKDLKEFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTPSKEERDERVQHLLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVRPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFVAHDLSMVKYISDRIGVMHWGKMLEIGTSDA
VYNDPIHPYTKSLLSAIPEPDPEFEKGRVHMEYDPSAELDGQERQMHEITPGHFVLATEEEAAAYRAERNK

Nucleotide

• Length: 936 bp

>NTDB_id=559521 KEM15_RS07505 WP_274504176.1 1449664..1450599(-) (amiF) [Streptococcus parasuis strain NN1]
ATGAGCGAAAGTAGAAAAAAACTCGTTGAACTAAAAAATGTTTCATTGACTTTTAATGCAGGTAAGAAAAACGAAGTTAA
AGCCATTGACAATGTTTCCTTTGACATTTATGAAGGAGAGGTCTTTGGTCTCGTTGGTGAATCTGGGTCAGGAAAGACAA
CAGTTGGCCGTACCATTCTAAAGTTGTATGACTATAATGCTGGCGATATTCTCTTTGATGGCCAGTCAATTTCAAAGCTT
TCTGGAAAAGATTTGAAAGAATTTCGAAAAGATGCACAAATGATTTTCCAAGATCCTCAAGCTAGTTTGAATGGTCGTAT
GAAAATCAGAGATATTGTTGCAGAAGGTTTGGACATTCACGGCTTGACTCCTTCAAAAGAAGAACGGGATGAGCGTGTTC
AACATTTATTGGATTTAGTCGGTTTAAATAAGGATCATTTAACACGTTATCCGCATGAGTTTTCAGGTGGACAACGACAA
CGGATTGGTATTGCACGTGCCTTAGCAGTTCGTCCAAAATTCATTATCGCTGACGAACCGATTTCAGCTTTAGATGTTTC
CATTCAAGCACAAGTTGTTAATTTGATGCAAAAATTGCAGAGAGAACAAGGTCTAACCTACCTCTTTGTTGCACACGATT
TGTCAATGGTTAAGTACATCTCTGACCGTATTGGTGTTATGCACTGGGGTAAAATGTTGGAAATTGGAACGTCGGATGCT
GTTTACAATGATCCAATTCATCCGTACACGAAGAGTTTGCTTTCTGCTATCCCTGAACCGGATCCAGAATTTGAAAAAGG
TCGTGTCCATATGGAATACGATCCAAGTGCTGAATTAGATGGTCAAGAACGTCAGATGCATGAGATTACGCCTGGTCACT
TTGTATTGGCTACAGAAGAAGAGGCTGCGGCATACCGCGCTGAACGAAACAAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	52.922	99.035	0.524
amiF	Streptococcus thermophilus LMG 18311	52.597	99.035	0.521
amiF	Streptococcus salivarius strain HSISS4	52.273	99.035	0.518