Detailed information NTG0558762

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: KCL43_RS01540
• Genome accession: NZ_CP073275
• Coordinates: 304198..305133 (+)
• Length: 311 a.a.
• NCBI ID: WP_111677723.1
• Uniprot ID: A0AAX2LIV6
• Organism: Streptococcus equi subsp. zooepidemicus strain IN-6992
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 299198..310133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCL43_RS01520 (KCL43_01520)	-	299360..301018 (+)	1659	WP_165623316.1	peptide ABC transporter substrate-binding protein	-
KCL43_RS01525 (KCL43_01525)	-	301185..302099 (+)	915	WP_012514937.1	ABC transporter permease	-
KCL43_RS01530 (KCL43_01530)	-	302109..303140 (+)	1032	WP_021320347.1	ABC transporter permease	-
KCL43_RS01535 (KCL43_01535)	oppD	303152..304198 (+)	1047	WP_021320348.1	ABC transporter ATP-binding protein	Regulator
KCL43_RS01540 (KCL43_01540)	amiF	304198..305133 (+)	936	WP_111677723.1	ABC transporter ATP-binding protein	Regulator
KCL43_RS01545 (KCL43_01545)	rnjA	305724..307406 (-)	1683	WP_012514941.1	ribonuclease J1	-
KCL43_RS01550 (KCL43_01550)	-	307408..307638 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
KCL43_RS01555 (KCL43_01555)	tsaB	307924..308622 (+)	699	WP_165622647.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
KCL43_RS01560 (KCL43_01560)	rimI	308625..309050 (+)	426	WP_037583996.1	ribosomal protein S18-alanine N-acetyltransferase	-
KCL43_RS01565 (KCL43_01565)	tsaD	309040..310056 (+)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35071.16 Da
• Isoelectric Point: 7.6971

>NTDB_id=558762 KCL43_RS01540 WP_111677723.1 304198..305133(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERKRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEADQYRAERDL

Nucleotide

• Length: 936 bp

>NTDB_id=558762 KCL43_RS01540 WP_111677723.1 304198..305133(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAAGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAACTGTATGACATTAGTGATGGTGAGATTATCTTTAACGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCACAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGCCGTAT
GAAAATTAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AGGAGCTGTTAAAGCTTGTTGGGCTCAATCAGGACCATTTGACGCGCTACCCACATGAATTTTCCGGTGGTCAACGCCAG
CGCATTGGCATTGCGCGTGCCTTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCTCACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCTGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAA
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTACCGAGCAGAGCGTGACCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.248	98.392	0.534
amiF	Streptococcus thermophilus LMG 18311	53.922	98.392	0.531
amiF	Streptococcus salivarius strain HSISS4	53.595	98.392	0.527