Detailed information NTG0556384

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: J9319_RS12700
• Genome accession: NZ_CP072851
• Coordinates: 2435614..2437998 (-)
• Length: 794 a.a.
• NCBI ID: WP_035390959.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain 6ww6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2430614..2442998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9319_RS12665 (J9319_12665)	-	2431522..2432250 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
J9319_RS12670 (J9319_12670)	-	2432265..2433074 (+)	810	WP_210552103.1	transporter substrate-binding domain-containing protein	-
J9319_RS12675 (J9319_12675)	-	2433155..2433808 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
J9319_RS12680 (J9319_12680)	-	2433824..2434474 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
J9319_RS12685 (J9319_12685)	-	2434513..2434644 (-)	132	WP_008342695.1	YrzQ family protein	-
J9319_RS12690 (J9319_12690)	-	2434665..2434856 (-)	192	WP_003216308.1	hypothetical protein	-
J9319_RS12695 (J9319_12695)	-	2434870..2435328 (-)	459	WP_058214180.1	PRC-barrel domain-containing protein	-
J9319_RS12700 (J9319_12700)	recD2	2435614..2437998 (-)	2385	WP_035390959.1	ATP-dependent RecD-like DNA helicase	Machinery gene
J9319_RS12705 (J9319_12705)	-	2438018..2438671 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
J9319_RS12710 (J9319_12710)	mnmA	2438733..2439851 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
J9319_RS12715 (J9319_12715)	-	2439946..2441088 (-)	1143	WP_099496641.1	cysteine desulfurase family protein	-
J9319_RS12720 (J9319_12720)	-	2441107..2441526 (-)	420	WP_008342713.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88947.30 Da
• Isoelectric Point: 5.0173

>NTDB_id=556384 J9319_RS12700 WP_035390959.1 2435614..2437998(-) (recD2) [Bacillus altitudinis strain 6ww6]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=556384 J9319_RS12700 WP_035390959.1 2435614..2437998(-) (recD2) [Bacillus altitudinis strain 6ww6]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGAACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACAGCGGAAGAAATCGTCGGCAAGCTAGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTTTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCTGATAAGCTGGCTGCCGCACTTCAGGAGCATCAAGGG
CTTGAGCAAATTATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATCGAAACCCGTAAATTGCTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGTATTCAAAAAATTGTCTCTCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTTTCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCTGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTTGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAGTGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGGTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAGTCATGGATGCTGAACTAGCAGCTCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGTATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.503	100	0.806