Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   L1A04_RS13560 Genome accession   NZ_CP090879
Coordinates   2719293..2720579 (-) Length   428 a.a.
NCBI ID   WP_000121120.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SAUR_BFS2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2714293..2725579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A04_RS13555 (L1A04_13555) - 2717570..2719273 (-) 1704 WP_000814087.1 proline--tRNA ligase -
  L1A04_RS13560 (L1A04_13560) eeP 2719293..2720579 (-) 1287 WP_000121120.1 RIP metalloprotease RseP Regulator
  L1A04_RS13565 (L1A04_13565) - 2720791..2721573 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  L1A04_RS13570 (L1A04_13570) - 2721580..2722350 (-) 771 WP_000473705.1 isoprenyl transferase -
  L1A04_RS13575 (L1A04_13575) frr 2722723..2723277 (-) 555 WP_001280006.1 ribosome recycling factor -
  L1A04_RS13580 (L1A04_13580) pyrH 2723296..2724018 (-) 723 WP_000057330.1 UMP kinase -
  L1A04_RS13585 (L1A04_13585) tsf 2724155..2725036 (-) 882 WP_000201387.1 translation elongation factor Ts -
  L1A04_RS13590 (L1A04_13590) - 2725071..2725184 (-) 114 WP_001791405.1 hypothetical protein -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48136.50 Da        Isoelectric Point: 9.5201

>NTDB_id=556205 L1A04_RS13560 WP_000121120.1 2719293..2720579(-) (eeP) [Staphylococcus aureus strain SAUR_BFS2]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFKSFLIGSTYIFSAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=556205 L1A04_RS13560 WP_000121120.1 2719293..2720579(-) (eeP) [Staphylococcus aureus strain SAUR_BFS2]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCGAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTTCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACTTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACCGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTCTTCAAACCAATTGTATATGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTTCAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCGTTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATCGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395