Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J9253_RS14265 Genome accession   NZ_CP072801
Coordinates   2952502..2952996 (+) Length   164 a.a.
NCBI ID   WP_210221587.1    Uniprot ID   -
Organism   Thiothrix litoralis strain AS     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2947502..2957996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9253_RS14240 (J9253_14240) speA 2947701..2949602 (-) 1902 WP_210221583.1 biosynthetic arginine decarboxylase -
  J9253_RS14245 (J9253_14245) - 2949870..2950202 (+) 333 WP_028488804.1 rhodanese-like domain-containing protein -
  J9253_RS14250 (J9253_14250) dsrE2 2950287..2950751 (+) 465 WP_210221584.1 sulfur carrier protein DsrE2 -
  J9253_RS14255 (J9253_14255) - 2950823..2951437 (+) 615 WP_210221585.1 NAD(P)H-dependent oxidoreductase -
  J9253_RS14260 (J9253_14260) - 2951462..2952325 (+) 864 WP_210221586.1 metallophosphoesterase -
  J9253_RS14265 (J9253_14265) pilG 2952502..2952996 (+) 495 WP_210221587.1 PleD family two-component system response regulator Regulator
  J9253_RS14270 (J9253_14270) - 2953009..2953395 (+) 387 WP_210221588.1 response regulator -
  J9253_RS14275 (J9253_14275) - 2953388..2953915 (+) 528 WP_210221589.1 chemotaxis protein CheW -
  J9253_RS14280 (J9253_14280) - 2953915..2955054 (+) 1140 WP_210221590.1 methyl-accepting chemotaxis protein -
  J9253_RS14285 (J9253_14285) - 2955068..2956894 (+) 1827 WP_210221591.1 hypothetical protein -

Sequence

Protein


Download         Length: 164 a.a.        Molecular weight: 18108.81 Da        Isoelectric Point: 4.6631

>NTDB_id=555928 J9253_RS14265 WP_210221587.1 2952502..2952996(+) (pilG) [Thiothrix litoralis strain AS]
MPDNLNNTLERDLTGLKVVVVDDSKTILRTAEVLLSEQGCWVVTAGDGFESLAKISSFKPDVIFVDIMMPRLDGYQTCAL
IKANRQYRDTPVILLSSKDSIFDMARGRLAGSDKYLTKPFTKEDLLTAIYTHVKLPKRAGTVDANVLDAPTPAESTPFID
LIDD

Nucleotide


Download         Length: 495 bp        

>NTDB_id=555928 J9253_RS14265 WP_210221587.1 2952502..2952996(+) (pilG) [Thiothrix litoralis strain AS]
ATGCCTGATAACCTGAACAATACGCTTGAACGCGATCTGACCGGCCTGAAAGTCGTGGTAGTGGACGACAGCAAGACCAT
CCTGCGAACCGCTGAGGTTTTGCTGAGTGAGCAAGGCTGCTGGGTGGTGACGGCAGGTGATGGTTTTGAGTCGCTCGCTA
AAATTTCCTCCTTTAAGCCGGATGTCATTTTCGTGGACATTATGATGCCGCGCTTGGATGGTTATCAAACCTGTGCGCTG
ATCAAGGCCAACCGTCAATACCGCGACACCCCCGTCATCCTGTTGTCGAGCAAGGATAGCATTTTCGACATGGCACGCGG
ACGGCTAGCAGGTTCCGACAAATACCTCACCAAGCCGTTCACCAAAGAAGACCTGCTGACTGCGATCTACACCCACGTGA
AATTGCCAAAGAGAGCTGGAACAGTGGATGCCAATGTGCTCGATGCGCCTACTCCTGCTGAATCTACCCCCTTCATTGAC
CTGATTGACGATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(18-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64

76.22

0.488