Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SMUNUM_RS08790 Genome accession   NZ_AP014571
Coordinates   1780342..1782672 (-) Length   776 a.a.
NCBI ID   WP_002282608.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1775342..1787672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS08765 (SMNUM_1660) - 1775683..1775928 (-) 246 WP_002268629.1 hypothetical protein -
  SMUNUM_RS08770 (SMNUM_1661) - 1776233..1776436 (+) 204 WP_002263366.1 hypothetical protein -
  SMUNUM_RS08775 (SMNUM_1662) mutY 1777473..1778618 (+) 1146 WP_002263365.1 A/G-specific adenine glycosylase -
  SMUNUM_RS08780 (SMNUM_1663) - 1778806..1779855 (-) 1050 WP_002263364.1 zinc-dependent alcohol dehydrogenase family protein -
  SMUNUM_RS08785 (SMNUM_1664) trxA 1779953..1780267 (-) 315 WP_002263363.1 thioredoxin -
  SMUNUM_RS08790 (SMNUM_1665) mutS/mutS2 1780342..1782672 (-) 2331 WP_002282608.1 endonuclease MutS2 Machinery gene
  SMUNUM_RS08795 (SMNUM_1666) - 1782740..1783285 (-) 546 WP_002263361.1 CvpA family protein -
  SMUNUM_RS08800 (SMNUM_1667) - 1783282..1783587 (-) 306 WP_002263360.1 hypothetical protein -
  SMUNUM_RS08805 (SMNUM_1668) rnhC 1783783..1784694 (+) 912 WP_002284756.1 ribonuclease HIII -
  SMUNUM_RS08810 (SMNUM_1669) lepB 1784714..1785301 (+) 588 WP_002263358.1 signal peptidase I -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 87708.09 Da        Isoelectric Point: 6.5929

>NTDB_id=55576 SMUNUM_RS08790 WP_002282608.1 1780342..1782672(-) (mutS/mutS2) [Streptococcus mutans LP13]
MNTKILKALEFDKVKKQFAHFLQSEQGQMELNDLLPMTNQEKIERSFAEIADVAQIFQEYASFGFGHSQDISESLRRLEL
GADLNTQELLAVKRILQMSAELKDFYDNLENVDLQILDCLFEKVEMFPNLQGSLQAINDGGFIEDFASPELTKIRHHIHQ
NEQQIRQILQEMLKKQGDLLAENLIASRSGRSVLPVKNTYRHRIAGVVHDISASGNTVYIEPRAVVNLNEEMTQARADER
HEMTRILHDLSDRLRSQTDIIGNNAWLLGHIDFVRGKYLYMRENQASLPSLTTDQTIRLLSVRHPLLSNPIANDLHFEHD
TTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFKDIFADIGDEQSIEQSLSTFSSHMTHIVEILQKAN
KDSLVLFDELGAGTDPQEGAALAMSILEHLRLSDIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPG
RSNAFEIARRLGLSEIIVAEAENLTNTDSDVNKIIERLENQTIESRRRLDNIREVEQENLKFNRAVKKLYNEFSHAQDKE
LRKAKLKAQEIVDKALAESDFILKDLQDKAQLKPHEIIEAKGKLKKLAPEIELSKNKVLKKAKKKRAAKVGDDIIVSSYG
QRGTLTKRFKDGRWEAQVGLIKMTLQESEFDLVKSDKAQASQKRQAHLVKRTSQKAPSARLDLRGKRYEEAMQELDEFID
QALLNNMAQVDIIHGIGTGVIRDGVTKYLRRNKQVKEFGYAPQNAGGSGATIVTFK

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=55576 SMUNUM_RS08790 WP_002282608.1 1780342..1782672(-) (mutS/mutS2) [Streptococcus mutans LP13]
ATGAATACAAAGATTTTAAAAGCCTTAGAATTTGATAAGGTTAAAAAGCAATTTGCTCATTTTTTGCAGAGTGAGCAAGG
GCAAATGGAATTAAACGATTTATTACCTATGACCAATCAGGAAAAAATTGAACGTTCTTTTGCCGAAATTGCAGATGTAG
CACAGATTTTTCAGGAGTATGCTTCCTTTGGCTTTGGGCACAGTCAGGATATTTCAGAAAGTTTACGTCGTTTAGAATTA
GGAGCGGATCTCAATACTCAAGAGCTTTTGGCTGTCAAACGTATTTTGCAGATGTCAGCAGAGCTCAAGGACTTTTATGA
TAATTTAGAAAATGTTGATTTGCAAATTTTGGATTGCTTATTTGAAAAGGTTGAAATGTTTCCTAATTTGCAAGGGAGTC
TACAAGCCATCAATGATGGTGGCTTTATTGAAGATTTTGCTAGTCCTGAATTAACTAAAATTCGTCATCATATTCACCAA
AATGAACAACAAATTCGTCAAATTCTTCAGGAAATGTTGAAGAAACAAGGTGATTTATTGGCTGAAAACCTTATTGCCAG
TCGCAGTGGTCGCAGTGTTCTTCCAGTGAAAAATACTTATCGTCATCGTATTGCAGGTGTTGTTCATGATATTTCAGCTT
CAGGAAATACGGTTTACATTGAACCTCGAGCTGTTGTTAATTTAAATGAAGAGATGACTCAGGCGCGTGCAGACGAACGC
CATGAAATGACTCGCATTTTACATGATTTATCCGATAGGCTAAGATCACAAACAGATATTATTGGTAATAATGCTTGGTT
GCTTGGACATATTGATTTTGTTCGTGGGAAATACCTTTATATGAGAGAAAATCAAGCCAGTCTTCCTAGTTTAACAACGG
ATCAAACTATCCGTCTTTTGAGTGTACGTCATCCTCTGCTAAGTAATCCAATTGCCAATGATTTACATTTTGAACATGAT
ACAACAGCCATTTTAATTACAGGTCCTAATACGGGCGGTAAAACCATCATGTTAAAAACATTGGGAATAACGCAACTGAT
GGCTCAGTCAGGTCTTCCTATTTTGGCTGATGAGGGAAGTAAGGTTGCTGTTTTTAAAGACATCTTTGCAGACATTGGTG
ACGAACAGTCCATTGAGCAAAGTTTATCCACTTTTTCAAGTCATATGACACATATTGTCGAAATTCTGCAAAAGGCCAAT
AAAGACAGCTTAGTCCTTTTTGATGAACTTGGTGCTGGTACAGATCCACAAGAAGGGGCAGCCTTGGCCATGAGTATTCT
GGAACATTTACGCTTATCAGATATTAAAACAATGATTACCACCCATTATCCAGAGCTTAAGGCCTATGGTATCGAAACAG
AATTTATTGAAAATGCGAGTATGGAATTTGATATGGTGACGCTCAGCCCCACCTATCATTTTATGCAAGGAGTACCGGGA
CGATCCAATGCTTTTGAGATTGCACGTCGTTTAGGTTTGTCTGAAATTATTGTTGCAGAAGCGGAAAATTTGACGAATAC
GGATTCAGATGTTAATAAAATTATTGAACGTTTGGAAAATCAAACCATTGAAAGTCGCAGACGTTTGGATAATATTCGTG
AAGTGGAGCAGGAAAATCTCAAATTTAATCGAGCCGTCAAAAAACTTTATAATGAATTCTCACATGCACAAGACAAAGAG
TTGCGTAAGGCCAAACTAAAGGCTCAAGAGATTGTTGACAAGGCTCTTGCAGAGAGTGATTTTATTCTCAAAGATCTTCA
AGACAAAGCACAACTTAAGCCCCATGAAATTATTGAAGCTAAAGGCAAGCTCAAGAAGTTGGCTCCCGAGATAGAGCTTT
CGAAAAATAAGGTTCTTAAAAAAGCTAAGAAGAAACGTGCTGCGAAAGTTGGAGATGATATTATTGTCAGCAGTTATGGG
CAAAGAGGAACGCTTACTAAGCGCTTCAAAGATGGTCGTTGGGAAGCACAAGTAGGGCTGATCAAAATGACTTTACAAGA
GTCAGAGTTTGATTTAGTGAAATCAGACAAAGCCCAAGCATCGCAGAAAAGACAAGCTCACCTTGTCAAAAGGACTTCTC
AAAAGGCTCCTAGTGCTAGACTTGATTTACGTGGCAAGCGTTATGAAGAAGCGATGCAAGAATTAGATGAATTCATTGAT
CAGGCACTCTTGAACAATATGGCTCAGGTTGACATCATCCATGGTATCGGAACTGGTGTTATCCGTGATGGCGTAACTAA
ATATCTTCGCCGTAATAAGCAAGTTAAGGAGTTTGGCTATGCTCCTCAAAATGCAGGTGGTTCGGGCGCTACAATCGTGA
CTTTCAAATAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(701-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.721

100

0.403

Multiple sequence alignment