NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	LZ559_RS19045	Genome accession	NZ_CP090837
Coordinates	4234860..4237451 (+)	Length	863 a.a.
NCBI ID	WP_030812803.1	Uniprot ID	A0ABM9GXM0
Organism	Streptomyces sp. R527F
Function	degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 4229860..4242451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ559_RS19010 (LZ559_19010)	-	4230245..4231009 (+)	765	WP_044377244.1	ATP-binding cassette domain-containing protein	-
LZ559_RS19015 (LZ559_19015)	-	4231002..4231748 (+)	747	WP_234877007.1	ABC transporter permease	-
LZ559_RS19025 (LZ559_19025)	-	4232453..4233463 (-)	1011	WP_172593811.1	helix-turn-helix transcriptional regulator	-
LZ559_RS19030 (LZ559_19030)	-	4233703..4233867 (+)	165	WP_234331427.1	hypothetical protein	-
LZ559_RS19035 (LZ559_19035)	-	4233864..4234184 (+)	321	WP_003967571.1	hypothetical protein	-
LZ559_RS19040 (LZ559_19040)	-	4234298..4234699 (-)	402	WP_044377240.1	TIGR03618 family F420-dependent PPOX class oxidoreductase	-
LZ559_RS19045 (LZ559_19045)	clpC	4234860..4237451 (+)	2592	WP_030812803.1	ATP-dependent chaperone ClpB	Regulator
LZ559_RS19050 (LZ559_19050)	-	4237610..4238155 (+)	546	WP_030812805.1	YbjN domain-containing protein	-
LZ559_RS19055 (LZ559_19055)	-	4238233..4239399 (-)	1167	WP_032794672.1	pyridoxal phosphate-dependent aminotransferase	-
LZ559_RS19060 (LZ559_19060)	-	4239539..4239844 (+)	306	WP_044375128.1	hypothetical protein	-
LZ559_RS19065 (LZ559_19065)	-	4240520..4241041 (+)	522	WP_030812815.1	DUF2617 family protein	-

Sequence

Protein

Download Length: 863 a.a. Molecular weight: 94346.81 Da Isoelectric Point: 4.7075

                                >NTDB_id=555571 LZ559_RS19045 WP_030812803.1 4234860..4237451(+) (clpC) [Streptomyces sp. R527F]

MDAELTNKSRDAINAATDRAVKDGHPDLTPAHLLLALLEGRDNENVTDLLAAVEADQALVRGETERLLGGLPSVTGSTVA

PPQPNREMLAVIQDAAQRAKELGDDYISTEHLLIGVAAKGGRAGEILDGQGAGAKKLLAAFETSRGGRRVTTPDPEGQYK

ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVS

LDLGAMVAGAKYRGEFEERLKTVLSEIKESDGRIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE

YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAA

SRLRMEIDSSPLEIDELQRSVDRLRMEELALKNESDPASKQRLEKLRRDLADKEEELRGLNARWEKEKQGLNRVGELKER

LDELRGQAERAQRDGDFDAASKLLYGEIPGLERELEEAAEAEQEASKDKDTMVKEEVGPDDIADVVGAWTGIPAGRLLEG

ETQKLLRMESELGKRLIGQTEAVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDM

SEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTIL

ILTSNLGSQFLMDPLVKPEVKKQQVLDVVRASFKPEFINRLDDLVVFSALSGDELAHIAGLQIDRLAARLADRQLTLDVT

PEALAWLAQEGNDPAYGARPLRRLIQTAIGDRLAKEILSGEVRDGDTVRVDRAEDGLIVGPAS

Nucleotide

Download Length: 2592 bp

                                >NTDB_id=555571 LZ559_RS19045 WP_030812803.1 4234860..4237451(+) (clpC) [Streptomyces sp. R527F]

GTGGACGCCGAGCTGACCAACAAGAGCCGCGACGCGATCAACGCGGCCACCGACCGGGCCGTGAAGGACGGGCACCCCGA

CCTGACCCCGGCGCATCTGCTGCTCGCGCTGCTGGAGGGGCGGGACAACGAGAATGTGACCGACCTCCTCGCCGCTGTGG

AGGCCGACCAGGCGCTCGTGCGCGGCGAGACCGAGCGGCTGCTCGGGGGGCTGCCCAGCGTCACCGGGTCCACCGTCGCC

CCGCCGCAGCCCAACCGCGAGATGCTCGCCGTCATCCAGGACGCGGCCCAGCGGGCCAAGGAGCTGGGCGACGACTACAT

CTCCACCGAGCACCTGCTCATCGGCGTCGCCGCGAAGGGCGGGCGGGCTGGTGAGATCCTCGACGGACAAGGGGCCGGCG

CCAAGAAGCTGCTGGCCGCGTTCGAGACGAGCAGGGGAGGGCGCCGGGTGACCACACCCGATCCGGAGGGCCAGTACAAG

GCCCTGGAGAAGTTCGGCACCGACTTCACGGCCGCCGCGCGCGAGGGCAAGCTGGATCCGGTCATCGGCCGCGACCAGGA

GATCCGCCGCGTCGTGCAGGTGCTGTCGCGCCGGACGAAGAACAACCCCGTCCTCATCGGTGAGCCCGGCGTCGGCAAGA

CCGCCGTCGTCGAAGGGCTCGCCCAGCGCATCGTCAAGGGCGACGTCCCGGAGAGCCTCAAGGACAAGCGGCTCGTCTCG

CTGGACCTCGGCGCGATGGTCGCGGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGACCGTCCTCTCCGAGAT

CAAGGAGAGCGACGGCCGGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCGGGCGCGGGCGGCGACTCCG

CCATGGACGCGGGCAACATGCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCGCATGGTCGGCGCGACCACGCTCGACGAG

TACCGCGAGCGCATCGAGAAGGACCCCGCCCTGGAGCGCCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGTCCGTCGAGGA

CACCATCGCGATCCTGCGCGGTCTCAAGGGCCGGTACGAGGCGCACCACAAGGTGCAGATCGCGGACTCGGCGCTGGTGG

CCGCCGCGACCCTCTCCGACCGCTACATCACCTCCCGGTTCCTCCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCG

TCCCGGCTGCGGATGGAGATCGACTCCTCGCCGCTGGAGATCGACGAACTCCAGCGCTCCGTCGACCGGTTGAGGATGGA

GGAGCTGGCGCTGAAGAACGAGAGCGACCCCGCCTCCAAGCAGCGGCTGGAGAAGCTGCGCCGCGACCTCGCCGACAAGG

AGGAGGAGCTGCGCGGCCTCAACGCCCGCTGGGAGAAGGAGAAGCAGGGCCTCAACCGGGTCGGTGAGCTCAAGGAGCGC

CTCGACGAGCTGCGCGGCCAAGCCGAACGCGCTCAGCGTGACGGCGACTTCGACGCGGCCTCCAAGCTGCTGTACGGGGA

GATCCCGGGGCTCGAGAGGGAGTTGGAGGAGGCCGCCGAGGCCGAGCAGGAGGCGTCCAAGGACAAGGACACCATGGTCA

AGGAGGAGGTCGGGCCGGACGACATCGCGGACGTCGTCGGCGCCTGGACCGGCATCCCGGCCGGGCGGCTGCTGGAGGGC

GAGACGCAGAAGCTGCTGCGGATGGAGAGCGAACTCGGCAAGCGGCTGATCGGGCAGACCGAGGCCGTGCAGGCCGTCTC

CGACGCCGTACGCCGGACCAGGGCGGGCATCGCCGACCCCGACCGGCCCACCGGGTCGTTCCTCTTCCTCGGGCCGACCG

GCGTCGGCAAGACCGAGCTGGCCAAGGCGCTGGCGGACTTCCTCTTCGACGACGAGCGGGCCATGATCCGCATCGACATG

AGCGAGTACGGCGAGAAGCACAGCGTCGCCCGCCTGGTCGGCGCCCCGCCCGGTTACGTCGGGTACGAGGAGGGCGGTCA

GCTCACCGAGGCCGTCCGCCGACGCCCGTACAGCGTCGTGCTCCTGGACGAGGTCGAGAAGGCCCACCCCGAGGTCTTCG

ACATCCTGCTCCAGGTCCTCGACGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACCATCCTG

ATCCTCACCTCCAACCTCGGCTCCCAGTTCCTGATGGACCCCCTGGTCAAGCCCGAGGTGAAGAAGCAGCAGGTGCTGGA

CGTGGTGCGGGCGTCGTTCAAGCCGGAGTTCATCAACCGGCTCGACGACCTCGTGGTCTTCTCCGCCCTGTCCGGCGACG

AGCTGGCCCACATCGCCGGGCTCCAGATCGACCGACTCGCGGCCCGGCTGGCCGACCGGCAGCTCACCCTCGACGTCACA

CCCGAGGCGCTGGCCTGGCTCGCCCAGGAAGGCAACGACCCGGCGTACGGGGCGCGGCCGCTGCGCCGGCTCATCCAGAC

GGCGATCGGCGACCGGCTCGCCAAGGAGATCCTGTCCGGCGAGGTCCGCGACGGTGACACCGTACGGGTGGACCGGGCCG

AGGACGGGCTGATCGTCGGCCCCGCCTCGTAA