Detailed information
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | SMUNUM_RS02470 | Genome accession | NZ_AP014571 |
| Coordinates | 478764..479429 (+) | Length | 221 a.a. |
| NCBI ID | WP_002270131.1 | Uniprot ID | - |
| Organism | Streptococcus mutans LP13 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 473764..484429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUNUM_RS02450 (SMNUM_0438) | - | 474322..475413 (+) | 1092 | WP_002296940.1 | glycerol dehydrogenase | - |
| SMUNUM_RS02455 (SMNUM_0439) | cysK | 475747..476673 (-) | 927 | WP_226783774.1 | cysteine synthase A | - |
| SMUNUM_RS02460 (SMNUM_0440) | - | 476764..477393 (-) | 630 | WP_002263027.1 | YigZ family protein | - |
| SMUNUM_RS02465 (SMNUM_0441) | comFA/cflA | 477466..478767 (+) | 1302 | WP_002277412.1 | DEAD/DEAH box helicase | Machinery gene |
| SMUNUM_RS02470 (SMNUM_0442) | comFC/cflB | 478764..479429 (+) | 666 | WP_002270131.1 | ComF family protein | Machinery gene |
| SMUNUM_RS02475 (SMNUM_0443) | raiA | 479508..480056 (+) | 549 | WP_002263024.1 | ribosome-associated translation inhibitor RaiA | - |
| SMUNUM_RS02480 (SMNUM_0444) | - | 480180..481274 (+) | 1095 | WP_002266342.1 | hypothetical protein | - |
| SMUNUM_RS02485 (SMNUM_0445) | - | 481294..482994 (+) | 1701 | WP_168747575.1 | hypothetical protein | - |
| SMUNUM_RS02490 (SMNUM_0446) | - | 483074..483709 (-) | 636 | WP_019805346.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 26031.08 Da Isoelectric Point: 8.9825
>NTDB_id=55514 SMUNUM_RS02470 WP_002270131.1 478764..479429(+) (comFC/cflB) [Streptococcus mutans LP13]
MNCLICHLPFESKYYFYSIFFLKTSRDFVCPPCFAKFQFISEKHCLNCYKEGEGDICQDCHKWQNLKKEVHHKALFCYNQ
AMKDYFSAYKFQGDYLLRKVFIKPIKEALREYTNYTLVPIPLSSSSLENRGFNQVQAFLDEAKLSYHDLLGKEDGSVKQS
SKTRQERLKTQQNFYLRKHKELPDKVMLVDDIYTTGMTIQLASQLLRENGVKTIKSFSLAR
MNCLICHLPFESKYYFYSIFFLKTSRDFVCPPCFAKFQFISEKHCLNCYKEGEGDICQDCHKWQNLKKEVHHKALFCYNQ
AMKDYFSAYKFQGDYLLRKVFIKPIKEALREYTNYTLVPIPLSSSSLENRGFNQVQAFLDEAKLSYHDLLGKEDGSVKQS
SKTRQERLKTQQNFYLRKHKELPDKVMLVDDIYTTGMTIQLASQLLRENGVKTIKSFSLAR
Nucleotide
Download Length: 666 bp
>NTDB_id=55514 SMUNUM_RS02470 WP_002270131.1 478764..479429(+) (comFC/cflB) [Streptococcus mutans LP13]
ATGAACTGTCTCATTTGTCACTTGCCTTTTGAGAGTAAATATTATTTTTATTCTATTTTCTTCTTGAAAACTTCAAGAGA
TTTTGTTTGCCCACCTTGCTTTGCGAAATTTCAATTCATATCTGAAAAACATTGCCTAAATTGTTATAAGGAGGGAGAAG
GAGATATCTGTCAAGATTGCCACAAATGGCAAAATCTCAAAAAGGAGGTTCATCACAAAGCTCTCTTTTGTTACAATCAA
GCTATGAAAGATTATTTCAGTGCTTACAAATTTCAAGGGGATTATCTTTTAAGAAAGGTCTTTATAAAGCCTATTAAAGA
AGCCTTAAGAGAGTATACTAATTATACTTTGGTTCCCATTCCACTCAGCTCTTCAAGTTTAGAGAATCGTGGTTTTAATC
AAGTGCAAGCTTTTTTAGATGAGGCAAAATTGTCTTATCATGATTTATTAGGCAAAGAAGATGGTAGTGTAAAACAATCA
AGTAAAACACGTCAAGAACGCCTAAAGACTCAACAAAACTTTTATTTAAGGAAACATAAAGAATTACCTGATAAAGTGAT
GCTAGTTGATGATATCTATACAACGGGTATGACAATTCAATTGGCCAGTCAATTATTGCGTGAAAATGGTGTGAAAACAA
TAAAATCCTTTTCTTTAGCAAGGTAA
ATGAACTGTCTCATTTGTCACTTGCCTTTTGAGAGTAAATATTATTTTTATTCTATTTTCTTCTTGAAAACTTCAAGAGA
TTTTGTTTGCCCACCTTGCTTTGCGAAATTTCAATTCATATCTGAAAAACATTGCCTAAATTGTTATAAGGAGGGAGAAG
GAGATATCTGTCAAGATTGCCACAAATGGCAAAATCTCAAAAAGGAGGTTCATCACAAAGCTCTCTTTTGTTACAATCAA
GCTATGAAAGATTATTTCAGTGCTTACAAATTTCAAGGGGATTATCTTTTAAGAAAGGTCTTTATAAAGCCTATTAAAGA
AGCCTTAAGAGAGTATACTAATTATACTTTGGTTCCCATTCCACTCAGCTCTTCAAGTTTAGAGAATCGTGGTTTTAATC
AAGTGCAAGCTTTTTTAGATGAGGCAAAATTGTCTTATCATGATTTATTAGGCAAAGAAGATGGTAGTGTAAAACAATCA
AGTAAAACACGTCAAGAACGCCTAAAGACTCAACAAAACTTTTATTTAAGGAAACATAAAGAATTACCTGATAAAGTGAT
GCTAGTTGATGATATCTATACAACGGGTATGACAATTCAATTGGCCAGTCAATTATTGCGTGAAAATGGTGTGAAAACAA
TAAAATCCTTTTCTTTAGCAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
44.796 |
100 |
0.448 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
44.796 |
100 |
0.448 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
44.344 |
100 |
0.443 |
| comFC/cflB | Streptococcus pneumoniae D39 |
44.344 |
100 |
0.443 |
| comFC/cflB | Streptococcus pneumoniae R6 |
44.344 |
100 |
0.443 |
| comFC/cflB | Streptococcus mitis SK321 |
43.891 |
100 |
0.439 |