Detailed information NTG0554591

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LZ754_RS03900
• Genome accession: NZ_CP090511
• Coordinates: 879564..880931 (+)
• Length: 455 a.a.
• NCBI ID: WP_027699990.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 874564..885931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ754_RS03890 (LZ754_03890)	-	876326..878236 (+)	1911	WP_004083744.1	DUF3857 domain-containing transglutaminase family protein	-
LZ754_RS03895 (LZ754_03895)	lolA	878799..879425 (+)	627	WP_051247953.1	outer membrane lipoprotein chaperone LolA	-
LZ754_RS03900 (LZ754_03900)	rarA	879564..880931 (+)	1368	WP_027699990.1	replication-associated recombination protein A	Machinery gene
LZ754_RS03905 (LZ754_03905)	crcB	881092..881493 (+)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
LZ754_RS03910 (LZ754_03910)	-	882169..883656 (+)	1488	WP_234499919.1	ATP-binding protein	-
LZ754_RS03915 (LZ754_03915)	folK	883782..884297 (+)	516	WP_234499986.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
LZ754_RS03920 (LZ754_03920)	-	884308..885045 (-)	738	WP_234499920.1	pteridine reductase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50808.02 Da
• Isoelectric Point: 6.5799

>NTDB_id=554591 LZ754_RS03900 WP_027699990.1 879564..880931(+) (rarA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=554591 LZ754_RS03900 WP_027699990.1 879564..880931(+) (rarA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCT
ACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTAC
AGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGC
TACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGTCT
GGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGC
GTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36