Detailed information NTG0554532

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LZ759_RS03705
• Genome accession: NZ_CP090510
• Coordinates: 859428..860795 (+)
• Length: 455 a.a.
• NCBI ID: WP_027699990.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain LA-Y3C
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 854428..865795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ759_RS03695 (LZ759_03695)	-	856203..858113 (+)	1911	WP_004083744.1	DUF3857 domain-containing transglutaminase family protein	-
LZ759_RS03700 (LZ759_03700)	lolA	858676..859302 (+)	627	WP_051247953.1	outer membrane lipoprotein chaperone LolA	-
LZ759_RS03705 (LZ759_03705)	rarA	859428..860795 (+)	1368	WP_027699990.1	replication-associated recombination protein A	Machinery gene
LZ759_RS03710 (LZ759_03710)	crcB	860956..861357 (+)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
LZ759_RS03715 (LZ759_03715)	-	862034..863530 (+)	1497	WP_071869771.1	ATP-binding protein	-
LZ759_RS03720 (LZ759_03720)	folK	863655..864170 (+)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
LZ759_RS03725 (LZ759_03725)	-	864181..864918 (-)	738	WP_004083738.1	pteridine reductase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50808.02 Da
• Isoelectric Point: 6.5799

>NTDB_id=554532 LZ759_RS03705 WP_027699990.1 859428..860795(+) (rarA) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=554532 LZ759_RS03705 WP_027699990.1 859428..860795(+) (rarA) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCT
ACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTAC
AGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGC
TACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGTCT
GGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGC
GTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36