Detailed information NTG0554368

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LZ755_RS08120
• Genome accession: NZ_CP090504
• Coordinates: 1702765..1704126 (-)
• Length: 453 a.a.
• NCBI ID: WP_234056300.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. morus strain Riv25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1697765..1709126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ755_RS08100 (LZ755_08100)	-	1698645..1699382 (+)	738	WP_004083738.1	pteridine reductase	-
LZ755_RS08105 (LZ755_08105)	folK	1699393..1699908 (-)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
LZ755_RS08110 (LZ755_08110)	-	1700033..1701529 (-)	1497	WP_038229850.1	ATP-binding protein	-
LZ755_RS08115 (LZ755_08115)	crcB	1702203..1702604 (-)	402	WP_038229848.1	fluoride efflux transporter CrcB	-
LZ755_RS08120 (LZ755_08120)	rarA	1702765..1704126 (-)	1362	WP_234056300.1	replication-associated recombination protein A	Machinery gene
LZ755_RS08125 (LZ755_08125)	lolA	1704307..1704933 (-)	627	WP_004089126.1	outer membrane lipoprotein chaperone LolA	-
LZ755_RS08130 (LZ755_08130)	-	1705495..1707405 (-)	1911	WP_038229844.1	DUF3857 domain-containing transglutaminase family protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50601.87 Da
• Isoelectric Point: 7.1006

>NTDB_id=554368 LZ755_RS08120 WP_234056300.1 1702765..1704126(-) (rarA) [Xylella fastidiosa subsp. morus strain Riv25]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRSVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSQASLLEIAKAADGDVRRALTLLEIAAELAQDEQITADLLS
QVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAW
DIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENG
VALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1362 bp

>NTDB_id=554368 LZ755_RS08120 WP_234056300.1 1702765..1704126(-) (rarA) [Xylella fastidiosa subsp. morus strain Riv25]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTTGCTT
CCGGGCATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGTCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATTGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTCAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGCAGATAACCGCTGACTTGCTTTCG
CAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCACAAGAG
TGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCTACTTGG
CCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAGGCTTGG
GATATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTACAGCAAA
ATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGCTACATC
TGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAGAACGGT
GTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTATCAACCGGTATCCCGCGGTCTGGAGAT
TAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGCGTGCAT
AG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (60-168)

• MgsA AAA+ ATPase C terminal (MgsA_C) (271-436)

• AAA C-terminal domain (AAA_assoc_2) (194-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.48	93.377	0.369