Detailed information NTG0553397

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7U05_RS05280
• Genome accession: NZ_CP072443
• Coordinates: 1008129..1009010 (-)
• Length: 293 a.a.
• NCBI ID: WP_116920256.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24724
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1003129..1014010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U05_RS05255 (J7U05_05250)	vicR	1003834..1004541 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7U05_RS05260 (J7U05_05255)	-	1005068..1005835 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7U05_RS05265 (J7U05_05260)	-	1005847..1006680 (+)	834	WP_116920255.1	transporter substrate-binding domain-containing protein	-
J7U05_RS05270 (J7U05_05265)	-	1006698..1007396 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
J7U05_RS05275 (J7U05_05270)	-	1007408..1008058 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
J7U05_RS05280 (J7U05_05275)	endA	1008129..1009010 (-)	882	WP_116920256.1	DNA/RNA non-specific endonuclease	Machinery gene
J7U05_RS05285 (J7U05_05280)	-	1009072..1009260 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7U05_RS05290 (J7U05_05285)	murA	1009262..1010533 (-)	1272	WP_116920257.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7U05_RS05295 (J7U05_05290)	-	1010603..1010839 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7U05_RS05300 (J7U05_05295)	galE	1011027..1012040 (-)	1014	WP_116920258.1	UDP-glucose 4-epimerase GalE	-
J7U05_RS05305 (J7U05_05300)	-	1012055..1012510 (-)	456	WP_240320552.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31817.55 Da
• Isoelectric Point: 10.1789

>NTDB_id=553397 J7U05_RS05280 WP_116920256.1 1008129..1009010(-) (endA) [Streptococcus thermophilus strain S24724]
MVKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=553397 J7U05_RS05280 WP_116920256.1 1008129..1009010(-) (endA) [Streptococcus thermophilus strain S24724]
ATGGTAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTAATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.238	86.007	0.604
endA	Streptococcus pneumoniae D39	70.238	86.007	0.604
endA	Streptococcus pneumoniae R6	70.238	86.007	0.604
endA	Streptococcus pneumoniae TIGR4	70.238	86.007	0.604