Detailed information NTG0553282

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7T61_RS05560
• Genome accession: NZ_CP072441
• Coordinates: 1056237..1057118 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24728
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1051237..1062118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T61_RS05535 (J7T61_05545)	vicR	1051932..1052639 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7T61_RS05540 (J7T61_05550)	-	1053175..1053942 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7T61_RS05545 (J7T61_05555)	-	1053954..1054787 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
J7T61_RS05550 (J7T61_05560)	-	1054805..1055503 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
J7T61_RS05555 (J7T61_05565)	-	1055515..1056165 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
J7T61_RS05560 (J7T61_05570)	endA	1056237..1057118 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
J7T61_RS05565 (J7T61_05575)	-	1057180..1057368 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7T61_RS05570 (J7T61_05580)	murA	1057370..1058641 (-)	1272	WP_372429123.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7T61_RS05575 (J7T61_05585)	-	1058711..1058947 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7T61_RS05580 (J7T61_05590)	galE	1059135..1060148 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
J7T61_RS05585 (J7T61_05595)	-	1060163..1060618 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=553282 J7T61_RS05560 WP_011681210.1 1056237..1057118(-) (endA) [Streptococcus thermophilus strain S24728]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=553282 J7T61_RS05560 WP_011681210.1 1056237..1057118(-) (endA) [Streptococcus thermophilus strain S24728]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594