Detailed information NTG0553107

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7T69_RS05730
• Genome accession: NZ_CP072438
• Coordinates: 1103406..1104287 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24733
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1098406..1109287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T69_RS05705 (J7T69_05695)	vicR	1099110..1099817 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7T69_RS05710 (J7T69_05700)	-	1100344..1101111 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7T69_RS05715 (J7T69_05705)	-	1101123..1101956 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
J7T69_RS05720 (J7T69_05710)	-	1101974..1102672 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
J7T69_RS05725 (J7T69_05715)	-	1102684..1103334 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
J7T69_RS05730 (J7T69_05720)	endA	1103406..1104287 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
J7T69_RS05735 (J7T69_05725)	-	1104349..1104537 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7T69_RS05740 (J7T69_05730)	murA	1104539..1105810 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7T69_RS05745 (J7T69_05735)	-	1105880..1106116 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7T69_RS05750 (J7T69_05740)	galE	1106304..1107317 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
J7T69_RS05755 (J7T69_05745)	-	1107332..1107787 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=553107 J7T69_RS05730 WP_011681210.1 1103406..1104287(-) (endA) [Streptococcus thermophilus strain S24733]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=553107 J7T69_RS05730 WP_011681210.1 1103406..1104287(-) (endA) [Streptococcus thermophilus strain S24733]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594