Detailed information NTG0553024

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LV497_RS04600
• Genome accession: NZ_CP090007
• Coordinates: 1050238..1051506 (-)
• Length: 422 a.a.
• NCBI ID: WP_002885641.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain SALI-10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1045238..1056506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LV497_RS04570 (LV497_04570)	-	1046527..1046937 (-)	411	WP_002885750.1	membrane protein	-
LV497_RS04575 (LV497_04575)	-	1046934..1047368 (-)	435	WP_022496078.1	low molecular weight protein-tyrosine-phosphatase	-
LV497_RS04580 (LV497_04580)	-	1047644..1048936 (-)	1293	WP_037601293.1	adenylosuccinate synthase	-
LV497_RS04585 (LV497_04585)	-	1049186..1049692 (-)	507	WP_002885695.1	DNA topology modulation protein	-
LV497_RS04600 (LV497_04600)	rarA	1050238..1051506 (-)	1269	WP_002885641.1	replication-associated recombination protein A	Machinery gene
LV497_RS04605 (LV497_04605)	rpmB	1051676..1051864 (+)	189	WP_002885786.1	50S ribosomal protein L28	-
LV497_RS04610 (LV497_04610)	-	1051991..1052257 (+)	267	WP_002885737.1	IreB family regulatory phosphoprotein	-
LV497_RS04615 (LV497_04615)	ruvX	1052257..1052676 (+)	420	WP_002885830.1	Holliday junction resolvase RuvX	-
LV497_RS04620 (LV497_04620)	-	1052783..1053088 (+)	306	WP_002887079.1	DUF1292 domain-containing protein	-
LV497_RS04625 (LV497_04625)	-	1053300..1054946 (+)	1647	WP_245084094.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46582.02 Da
• Isoelectric Point: 5.8803

>NTDB_id=553024 LV497_RS04600 WP_002885641.1 1050238..1051506(-) (rarA) [Streptococcus salivarius strain SALI-10]
MPDNLALRMRPRTISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
GVLEDKERGFDFDVQLDEDALDFIATATNGDLRSAYNSLDLAVMSTPASEDGLRHITLDTVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKVGFPEARILIANVV
VDLALSPKSNSAYMAMDAALADLRKSGNLPIPRHLRDGHYAGSKELGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=553024 LV497_RS04600 WP_002885641.1 1050238..1051506(-) (rarA) [Streptococcus salivarius strain SALI-10]
ATGCCAGATAATCTTGCTCTACGCATGCGTCCACGTACAATTTCAGAGGTGATTGGTCAGAAGCATTTGGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAAGCGAATATGCTGTCGTCAATGATTCTCTACGGGCCACCAGGAATCGGGAAGACCT
CAATAGCTAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACCTTTAATGCTACTGTTGATAGCAAGAAACGCCTA
CAGGAAATTGCGGAAGAGGCTAAATTTTCAGGTGGCTTAGTTCTGCTTCTAGATGAGATTCATCGTTTGGATAAAGCTAA
ACAAGACTTTTTATTGCCACTCTTAGAGAATGGTAATATTATCATGATTGGGGCTACAACGGAGAATCCGTTTTTTTCTG
TCACACCAGCCATCCGTAGTCGTGTACAAATATTTGAGTTGGAACCACTCTCTAACGAGGATATTAAGGAAGCTATACTA
GGTGTTCTAGAGGACAAGGAGCGTGGCTTTGACTTTGATGTCCAGTTAGATGAGGATGCTCTAGATTTTATTGCTACGGC
TACTAATGGTGATTTACGTTCGGCTTATAATTCCTTAGATTTAGCTGTCATGTCGACGCCAGCTTCAGAAGATGGGCTTC
GCCATATTACTTTAGATACAGTGGAAAATAGTTTACAACGTAGCTATATCACCATGGATAAAGACGGTGATGGACACTAT
GATGTACTTTCTGCTTTGCAAAAATCTATTCGAGGCTCTGATGTTAATGCCAGTCTTCACTATGCAGCACGTTTGGTTGA
AGCAGGAGATCTCCCTAGTCTAGCACGACGCTTGACTGTGATTGCGTACGAGGATATTGGTTTAGCTAATCCTGATGCGC
AAGTTCACACGGTTACAGCTTTGGAAGCTGCACAGAAAGTAGGTTTCCCAGAGGCGCGTATTTTGATTGCCAATGTAGTT
GTTGACTTAGCTTTATCTCCTAAGTCGAATTCGGCTTATATGGCTATGGATGCTGCCTTGGCAGACCTTAGAAAATCAGG
GAATTTACCTATTCCTCGTCATTTGAGAGATGGACACTATGCTGGAAGCAAGGAACTGGGCAATGCACAAGATTACAAGT
ATCCCCATGCTTATCCTGAAAAGTGGGTCAAACAACAATATCTTCCGGATAAATTAAGAGGTGTGAATTATTTCCAACCC
AATGAAACCGGGAAATATGAAAGAGCTCTTGGAGCTAATAAAGAACGGATCGATAAGTTATCTAGGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.143	99.289	0.597