Detailed information NTG0552935

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: J7U23_RS06965
• Genome accession: NZ_CP072435
• Coordinates: 1344778..1345704 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24736
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1339778..1350704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U23_RS06935 (J7U23_06875)	-	1339848..1340642 (-)	795	WP_179970964.1	HAD-IIB family hydrolase	-
J7U23_RS06940 (J7U23_06880)	-	1340825..1341202 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
J7U23_RS06945 (J7U23_06885)	-	1341207..1341905 (+)	699	WP_372589868.1	ABC transporter ATP-binding protein	-
J7U23_RS06950 (J7U23_06890)	-	1341917..1342711 (+)	795	WP_179970966.1	ABC transporter permease	-
J7U23_RS06955 (J7U23_06895)	amiF	1342761..1343690 (-)	930	WP_179970967.1	ATP-binding cassette domain-containing protein	Regulator
J7U23_RS06960 (J7U23_06900)	amiE	1343683..1344768 (-)	1086	WP_179970968.1	ABC transporter ATP-binding protein	Regulator
J7U23_RS06965 (J7U23_06905)	amiD	1344778..1345704 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
J7U23_RS06970 (J7U23_06910)	amiC	1345704..1347197 (-)	1494	WP_179970969.1	ABC transporter permease	Regulator
J7U23_RS06975 (J7U23_06915)	amiA3	1347258..1349231 (-)	1974	WP_372589869.1	peptide ABC transporter substrate-binding protein	Regulator
J7U23_RS06980 (J7U23_06920)	-	1349467..1349657 (-)	191	Protein_1321	IS3 family transposase	-
J7U23_RS06985	-	1349648..1350060 (-)	413	Protein_1322	ATP-binding cassette domain-containing protein	-
J7U23_RS06990 (J7U23_06935)	-	1350092..1350406 (-)	315	Protein_1323	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=552935 J7U23_RS06965 WP_002946409.1 1344778..1345704(-) (amiD) [Streptococcus thermophilus strain S24736]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=552935 J7U23_RS06965 WP_002946409.1 1344778..1345704(-) (amiD) [Streptococcus thermophilus strain S24736]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964