Detailed information NTG0552867

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7T96_RS05525
• Genome accession: NZ_CP072434
• Coordinates: 1044140..1045021 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24742
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1039140..1050021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T96_RS05500 (J7T96_05400)	vicR	1039844..1040551 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7T96_RS05505 (J7T96_05405)	-	1041078..1041845 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7T96_RS05510 (J7T96_05410)	-	1041857..1042690 (+)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
J7T96_RS05515 (J7T96_05415)	-	1042708..1043406 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
J7T96_RS05520 (J7T96_05420)	-	1043418..1044068 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
J7T96_RS05525 (J7T96_05425)	endA	1044140..1045021 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
J7T96_RS05530 (J7T96_05430)	-	1045083..1045271 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7T96_RS05535 (J7T96_05435)	murA	1045273..1046544 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7T96_RS05540 (J7T96_05440)	-	1046614..1046850 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7T96_RS05545 (J7T96_05445)	galE	1047038..1048051 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
J7T96_RS05550 (J7T96_05450)	-	1048066..1048521 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=552867 J7T96_RS05525 WP_011681210.1 1044140..1045021(-) (endA) [Streptococcus thermophilus strain S24742]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=552867 J7T96_RS05525 WP_011681210.1 1044140..1045021(-) (endA) [Streptococcus thermophilus strain S24742]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594