Detailed information NTG0551750

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: J6I88_RS09990
• Genome accession: NZ_CP072305
• Coordinates: 2100429..2101130 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain KSK Sensitive
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2095429..2106130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6I88_RS09960 (J6I88_09960)	-	2095736..2096179 (-)	444	WP_001246675.1	SRPBCC family protein	-
J6I88_RS09965 (J6I88_09965)	tadA	2096249..2096752 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
J6I88_RS09970 (J6I88_09970)	-	2096759..2097883 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
J6I88_RS09975 (J6I88_09975)	ung	2097880..2098593 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
J6I88_RS09980 (J6I88_09980)	-	2098644..2099240 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
J6I88_RS09985 (J6I88_09985)	gspK	2099470..2100429 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
J6I88_RS09990 (J6I88_09990)	xcpW	2100429..2101130 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
J6I88_RS09995 (J6I88_09995)	xcpV	2101130..2101510 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
J6I88_RS10000 (J6I88_10000)	-	2101500..2102054 (-)	555	WP_000841373.1	type II secretion system protein	-
J6I88_RS10005 (J6I88_10005)	-	2102064..2102672 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
J6I88_RS10010 (J6I88_10010)	-	2102710..2103483 (-)	774	WP_000497298.1	TatD family hydrolase	-
J6I88_RS10015 (J6I88_10015)	-	2103501..2103842 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
J6I88_RS10020 (J6I88_10020)	-	2103854..2104834 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
J6I88_RS10025 (J6I88_10025)	kdsB	2104846..2105607 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=551750 J6I88_RS09990 WP_000594584.1 2100429..2101130(-) (xcpW) [Acinetobacter baumannii strain KSK Sensitive]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=551750 J6I88_RS09990 WP_000594584.1 2100429..2101130(-) (xcpW) [Acinetobacter baumannii strain KSK Sensitive]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996